Gene BMA10229_A3319 details

Gene Information

• Locus tag: BMA10229_A3319
• Symbol: ispD
• ID: 4792930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10229
• Kingdom: Bacteria
• Replicon accession: NC_008836
• Strand: +
• Start bp: 3376238
• End bp: 3376948
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 72%
• Product: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
• Protein accession: YP_001029255
• Protein GI: 124383825

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000022427
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCTCCC GACTTTTTGC CCTGATTCCG TGCGCCGGCA CCGGCAGCCG TTCCGGCTCG 
GCATTGCCGA AGCAATACCG CACGCTCGCC GGACGCGCGC TGCTGCACTA CACGCTTGCC 
GCGTTCGACG CATGCAGCGA GTTCGCGCAG ACGCTCGTCG TGATCTCTCC CGACGACGCC 
CACTTCGACG CGCGCCGCTT CGCCGGCCTG CGCTTCGCGG TGCGGCGCTG CGGCGGCGCG 
TCGCGGCAGG CGTCGGTGAT GAACGGGCTG ATCCAGCTCG CCGAATTCGG CGCGACGGAC 
GCCGACTGGG TGCTCGTGCA CGACGCCGCG CGCCCCGGCA TCACGCCGGC GCTGATCCGC 
ACGCTGATCG GCGCGCTGAA GGACGACCCC GTCGGCGGCA TCGTCGCGCT GCCGGTCGCC 
GACACGCTCA AGCGCGTGCC GGCGGGCGGC GACGCGATCG AGCGCACCGA ATCGCGCAAC 
GGCCTCTGGC AGGCGCAGAC GCCGCAGATG TTCCGCATCG GCATGCTGCG CGACGCGATC 
CGGCGCGCGC AGCTCGATGG CCACGACCTG ACCGACGAGG CGAGCGCGAT CGAATGGGCG 
GGCCACACGC CGCGCGTCGT GCAGGGCAGC CTGCGCAACT TCAAGGTCAC CTATCCGGAG 
GATTTCGACC TCGCGGAGGC GATCCTCGCG CAACCGGCGC GCGCTTCCTG A 

 

Protein sequence

MTSRLFALIP CAGTGSRSGS ALPKQYRTLA GRALLHYTLA AFDACSEFAQ TLVVISPDDA 
HFDARRFAGL RFAVRRCGGA SRQASVMNGL IQLAEFGATD ADWVLVHDAA RPGITPALIR 
TLIGALKDDP VGGIVALPVA DTLKRVPAGG DAIERTESRN GLWQAQTPQM FRIGMLRDAI 
RRAQLDGHDL TDEASAIEWA GHTPRVVQGS LRNFKVTYPE DFDLAEAILA QPARAS