| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_A3318 |
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| Symbol | mfd |
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| ID | 4792355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10229 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008836 |
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| Strand | - |
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| Start bp | 3372648 |
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| End bp | 3376217 |
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| Gene Length | 3570 bp |
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| Protein Length | 1189 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001029254 |
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| Protein GI | 124385069 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.101121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGA AGGACGGATT TTATAATACG TCTTTCGCCG CGATGCGCCG CGCCGAGCTC
GTCCGCCATC CGGCGTTCGC CAACCAGCCG CTCGTTATGT CAGACAACGC CTCCCCTTCG
CAGTCCCCCG TCGCGCTCGT CAAGGCGGGC CAGCGCTTCG CCTTCGACGG CGCGCACGGC
TCCGCCGACG CGCTCGTCAT CGCCCGCTAT CTCGCCGCGC ACCGCGCGCA GGTGCCGCTT
CTCGCCGTGA TCTGCGCGAA CGCGGTCGAC GCGCAACGGC TCGCGCAGGA GCTCGCCTAC
TTCGCGCCCG ACGCGCGCGT GCGCGTGCTG CCCGACTGGG AGACGCTGCC GTACGACACG
TTCTCGCCGC ACCAGGATCT CGTGTCCGAG CGGCTCGCGA CGCTGCACGA CCTCGGCGAA
GGCCGCTGCG ACATCCTGCT CGTGCCCGCG ACGACGGCGC TCTACCGGAT GCCGCCCGCG
TCGTTCCTCG CCGCGTACAC GTTCTCGTTC ACGCAGGGCG AGCGGCTCGA CGAAGCGAAG
CTGAAGGCGC AGCTGACGCT CGCCGGCTAC GAGCACGTGA GCCAGGTCGT GCGGCCCGGC
GAATACTGCG TGCGCGGCTC GCTGATCGAC CTGTTCCCGA TGGGCTCGCC GCTGCCGTAC
CGGATCGATC TGTTCGACGA TCAGGTCGAC TCGATCCGCG CGTTCGATCC GGACACGCAG
CGCAGCCTCT ACCCGGTGCG CGACGTGCGC CTGCTGCCCG GCCGCGAATT CCCGTTCGAC
GAGGCCGCGC GCACCGCGTT CCGAAGCCGC TGGCGCGAGA CGTTCGAGGG CGACCCGAGC
CGCGCGCCGA TCTACAAGGA CATCGGCAAC GGCGTGCCGT CGGCCGGCAT CGAGTATTAC
CTGCCGCTCT TCTTCGACGA GACGGCGACG CTCTTCCACT ATCTGCCCGA GCGCGCGCAG
CTCGTGTTCA CGGGCGATCT CGACGCGGCG ATCAAGCGCT TCACCGCCGA CACGAAGCAG
CGCCACGCGT TCCTGTCGCA CGATCGCGAG CGGCCGATCC TCGAGCCGCA GCGCCTGTTC
CTCTCCGACG ACGATTTCTA CCTGCTCGCC AAGCCGTTCG CGCGGATCGT GCTGCCCGCG
CAGCCGTCGG GCGGCTGGGC CGCGCCGCTG CCGAATCTCG CGCTCGAGCG CCACGCGGAC
GCGCCGCTCG CCGCGTTCGC CGCGTATCTC GAAACGACGA AGAACCGCGT GCTTTTCACC
GTCGAATCGG CGGGCCGCCG CGAGACGATC GCGCAACTGT TCGCCGAGCA CCATCTGCGG
CCGGCGGGCA GCGACAGCTT CGCCGCGTGG CTCGCGAGCG ACGAGCGCTT CGCGCTCGGC
GTCGCGCCCC TCGCGAACGG CTTCGCGGTG CCGGGCGAGG GTTACGCGAT CGTCACCGAG
ACCGAGCTGT ACGGCGCGCT CGGCCGCCGC GCGGGACGCC GCCGCCAGGA ACAGGCGAGC
AACGTCGACG CGATGGTGCG CGATCTGTCC GAGCTGAAGG TGGGCGACCC GGTCGTCCAT
GCGCAGCACG GGATCGGCCG CTACATGGGG CTCGTGTCGA TGGATCTCGG CGAAGGCGAC
ACCGAGTTCC TGCATCTCGA ATACGCGGGC GACAGCAAGC TGTACGTGCC CGTCGCGCAA
CTGCACGTGA TCTCGCGCTA CAGCGGCGCG GACCCGGACA GCGCGCCGCT GCACGCGCTC
GGCTCCGGCC AGTGGGAGCG CGCGAAGCGC CGCGCCGCGC AGCAGATCCG CGATACGGCC
GCCGAGCTGC TGAACCTGTA CGCGCGCCGC GCGGCGCGCG AGGGCCACGC GTTCGGGCTC
GACCCGCGCG ACTACGTGAA GTTCGCCGAC AGCTTCGGCT TCGAGGAAAC GCCGGACCAG
GCCGCGGCGA TCGCGGCCGT GATCGGCGAC ATGACAAGCG GCAAGCCGAT GGACCGCCTC
GTGTGCGGCG ACGTCGGCTT CGGCAAGACC GAGGTCGCGC TGCGCGCGGC ATTCATCGCG
GTGATGGGCG GCAAGCAGGT CGCGCTGCTC TCGCCGACCA CGCTGCTCGC CGAGCAGCAC
ACGCAGACCT TCGCCGACCG CTTCGCGGAC TGGCCGGTGC GCATCGCCGA GCTGTCGCGC
TTCAAGACCG CGAAGGAAGT GAATGCGGCG ATCGCGCAGA TCAACGAAGG CAGCGTCGAC
ATCGTGATCG GCACGCACAA GCTGCTGTCG TCGGACGTGC AGTTCAAGCG CCTCGGCCTC
GTGATCATCG ACGAGGAGCA CCGCTTCGGC GTGCGCCAGA AGGAAGCGCT GAAGGCGCTG
CGCGCGGAAG TGGACGTGCT CACGCTGACC GCGACGCCGA TCCCGCGCAC GCTCGGCATG
GCGCTCGAAG GGCTGCGCGA TTTCTCGGTG ATCGCGACCG CGCCGCAGAA GCGGCTCGCG
ATCAAGACCT TCGTGCGCCG CGAGGAAGAA AGCGTGATCC GCGAGGCGAT GCTGCGCGAG
CTCAAGCGCG GCGGCCAGGT GTACTTCCTG CACAACGAGG TCGAGACGAT CGAGAACCGC
AAGGCGATGC TCGAGGAACT GGTGCCCGAG GCGCGCATCG TGATCGCGCA CGGCCAGATG
CACGAGCGCG AGCTCGAACG CGTGATGCGC GATTTCGTCG CGCAACGCGC GAACGTGCTG
CTGTGCACGA CGATCATCGA GACCGGCATC GACGTGCCGA GCGCGAACAC GATCATCATG
CACCGCGCGG ACAAGTTCGG CCTCGCGCAG TTGCACCAGT TGCGCGGGCG CGTCGGACGC
TCGCACCATC AGGCATACGC GTACCTGCTC GTGCACGATC CGCAAGCGCT GACGAAGCAG
GCGCAGCGCC GGCTTGAGGC GATCCAGCAG ATGGAGGAGC TCGGCTCGGG CTTCTATCTC
GCGATGCACG ACCTCGAGAT CCGCGGCACC GGCGAAGTGC TCGGCGACAA GCAGTCGGGC
GAGATCCACG AGATCGGCTT CCAGCTCTAC ACCGAGATGC TGAACGATGC GGTGAAGGCG
CTGAAGAACG GCAAGGAGCC GGACCTGACC GCGCCGCTCG CCGCGACGAC CGAGATCAAC
CTGCACGCGC CCGCGATCCT GCCCGCCGAC TATTGCGGCG ACGTGCAGGA GCGGCTGTCG
CTGTACAAGC GGCTCGCGAA CTGCGAGCAC GGCGATGCGA TCGACGGCAT CCAGGAGGAG
CTGATCGACC GCTTCGGCAA ACTGCCGCCG CAGGCGCACG CGCTCGTCGA AACGCACCGG
CTGCGGCTCG CCGCGAAGCC GCTTGGCATC GTGAAGATCG ACGCGAGCGA AGCGGCGATC
GGGCTGCAGT TCGTGCCGAA TCCGCCGATC GATCCGATGC GGATCATCGA CATGGTGCAG
AAGCACCGGC ACATCAAGCT CGCGGGCCAG GACAAGCTGC GCATCGAGAC GCGCACGCCG
GACCTCGCGG TGCGCGTGTC GACGGTGAAG GAAACGCTGC GCGCGCTCGG CCAGCCGCAG
CAGCCGCGCG CGCAGGCGGC GGCGCGGTAG
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| Protein sequence | MKSKDGFYNT SFAAMRRAEL VRHPAFANQP LVMSDNASPS QSPVALVKAG QRFAFDGAHG
SADALVIARY LAAHRAQVPL LAVICANAVD AQRLAQELAY FAPDARVRVL PDWETLPYDT
FSPHQDLVSE RLATLHDLGE GRCDILLVPA TTALYRMPPA SFLAAYTFSF TQGERLDEAK
LKAQLTLAGY EHVSQVVRPG EYCVRGSLID LFPMGSPLPY RIDLFDDQVD SIRAFDPDTQ
RSLYPVRDVR LLPGREFPFD EAARTAFRSR WRETFEGDPS RAPIYKDIGN GVPSAGIEYY
LPLFFDETAT LFHYLPERAQ LVFTGDLDAA IKRFTADTKQ RHAFLSHDRE RPILEPQRLF
LSDDDFYLLA KPFARIVLPA QPSGGWAAPL PNLALERHAD APLAAFAAYL ETTKNRVLFT
VESAGRRETI AQLFAEHHLR PAGSDSFAAW LASDERFALG VAPLANGFAV PGEGYAIVTE
TELYGALGRR AGRRRQEQAS NVDAMVRDLS ELKVGDPVVH AQHGIGRYMG LVSMDLGEGD
TEFLHLEYAG DSKLYVPVAQ LHVISRYSGA DPDSAPLHAL GSGQWERAKR RAAQQIRDTA
AELLNLYARR AAREGHAFGL DPRDYVKFAD SFGFEETPDQ AAAIAAVIGD MTSGKPMDRL
VCGDVGFGKT EVALRAAFIA VMGGKQVALL SPTTLLAEQH TQTFADRFAD WPVRIAELSR
FKTAKEVNAA IAQINEGSVD IVIGTHKLLS SDVQFKRLGL VIIDEEHRFG VRQKEALKAL
RAEVDVLTLT ATPIPRTLGM ALEGLRDFSV IATAPQKRLA IKTFVRREEE SVIREAMLRE
LKRGGQVYFL HNEVETIENR KAMLEELVPE ARIVIAHGQM HERELERVMR DFVAQRANVL
LCTTIIETGI DVPSANTIIM HRADKFGLAQ LHQLRGRVGR SHHQAYAYLL VHDPQALTKQ
AQRRLEAIQQ MEELGSGFYL AMHDLEIRGT GEVLGDKQSG EIHEIGFQLY TEMLNDAVKA
LKNGKEPDLT APLAATTEIN LHAPAILPAD YCGDVQERLS LYKRLANCEH GDAIDGIQEE
LIDRFGKLPP QAHALVETHR LRLAAKPLGI VKIDASEAAI GLQFVPNPPI DPMRIIDMVQ
KHRHIKLAGQ DKLRIETRTP DLAVRVSTVK ETLRALGQPQ QPRAQAAAR
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