| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_A2202 |
|---|
| Symbol | |
|---|
| ID | 4791325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008836 |
|---|
| Strand | - |
|---|
| Start bp | 2225230 |
|---|
| End bp | 2226561 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | sigma-54 dependent transcriptional regulator |
|---|
| Protein accession | YP_001028166 |
|---|
| Protein GI | 124385724 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0673896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATTTACT GGACGCATCA GCCTTCGACG CTGCTGCGCA AGGAACTCGC GCGCCGCGAC
TGGAAGATCT CCGTCGTCAC GAGCGCGAAC CAGGTGCGCA CGACGGCGGG CGAGGTCACG
GGCGGCATTC TCGATCTGAG CGCCGTGTCG ATCGACGAGA TGAACGCGGT GGCGGCCGTA
TGCGCGTCGC TGCGCAACGT CGCGTGGGTC GCGCTCGTCG AAGCGCAGCA GGCGAACGTG
CCGAACGTGC GCACGCTGCT GCGCGATTAC TGCTTCGACT ACATCACGCT GCCCGCGTCG
CATCAGCGGA TCGCGGATGC GGTGGGTCAC GCGTACGGGA TGGAATGCCT GTTCGCGCCG
AGCACGGCGC CGATCGCGTC CGCCGATCAG GGGATGATCG GCACGTGCGA CGCGATGCTG
CAACTGTTCG ACACGGTGCG CCGGATCGCG CGCACCGACG CGCCCGTGCT CGTGTCCGGC
GAGACAGGCA CCGGCAAGGA ACTCACCGCG GCCGCGATCC ATCAGCATTC CGCGCGCCGC
GCGGGCCCGT TCGTCGCGGT CAATTGCGGC GCGATTCCGC CGCATCTGCT GCAATCCGAA
CTATTCGGCT ACGAGCGCGG CGCATTCACC GGCGCGAGCA CGCGCAAGAT CGGCCATGTC
GAATCGGCGA ACGGCGGCAC GCTGCTGCTC GACGAAATCG GCGATTTGCC GCTCGAAAGC
CAGGCGAGCC TGCTGCGCTT CCTGCAGGAG CGCACGATTC ATCGGCTGGG CGGCAGCGAG
CCGGTGCCCG TCGACGTGCG CATCGTATCG GCGACGCACG TCGATCTGCG CGGCGCGATG
AACGAAGGGC GTTTCCGCGC GGACCTGTAT CACCGGCTGT GCGTGCTGCG CGTCGACCAG
CCGCCGCTGC GCGCGCGAGG CAAGGACATC GAACTGCTCG CGCGGCACAT GCTCGAGCGC
TTTCGCGCCG ACGCGCGGCA CCGCGTGCGC GGCTTCTCGA CCGATGCGAT CTCCGCGCTC
TACAAGCACG ATTGGCCGGG CAACGTGCGC GAGCTCATCA ACCGCGTGCG CCGCGCGCTC
GTGATGGCGG AAGGGCGGCT CATCACCGCG CACGATCTCG AGCTCGACCA TTGCACCGAG
GTCGCGCCGC TGTCGGTCGC CGCGATCCGC AAATCGATCG AGCGGGAAGT GATCGAGCTC
GCGCTGTTGC GCAATCGCGG GCGCCTCGCG GGCACCGCGC GCGAGCTCGG CATCTCGCGC
GCGACGCTGT ATCGGTGGAT GGAGGCGTAC GGCATCGAGC GCCCGCGCAG CACCGCGTCG
CCCGCCAATT GA
|
|---|
| Protein sequence | MIYWTHQPST LLRKELARRD WKISVVTSAN QVRTTAGEVT GGILDLSAVS IDEMNAVAAV
CASLRNVAWV ALVEAQQANV PNVRTLLRDY CFDYITLPAS HQRIADAVGH AYGMECLFAP
STAPIASADQ GMIGTCDAML QLFDTVRRIA RTDAPVLVSG ETGTGKELTA AAIHQHSARR
AGPFVAVNCG AIPPHLLQSE LFGYERGAFT GASTRKIGHV ESANGGTLLL DEIGDLPLES
QASLLRFLQE RTIHRLGGSE PVPVDVRIVS ATHVDLRGAM NEGRFRADLY HRLCVLRVDQ
PPLRARGKDI ELLARHMLER FRADARHRVR GFSTDAISAL YKHDWPGNVR ELINRVRRAL
VMAEGRLITA HDLELDHCTE VAPLSVAAIR KSIEREVIEL ALLRNRGRLA GTARELGISR
ATLYRWMEAY GIERPRSTAS PAN
|
|---|
| |