Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_A2167 |
Symbol | dapF |
ID | 4791787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008836 |
Strand | + |
Start bp | 2185156 |
End bp | 2186025 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | diaminopimelate epimerase |
Protein accession | YP_001028131 |
Protein GI | 124385583 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.636028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCT CGTTCACCAA GATGCACGGC GCGGGCAACG ACTTCGTCGT GCTCGACGGC TACACCCGCG CGCTGCCCCC GCTCACCGGC GCGCAGGTGC GCGCGCTCGC CGACCGCCAC TTCGGGATCG GCGCCGATCA GTTGCTGCTC GTCGAAAAGC CGACCGTCGA CGGCGCCGAT TTCAAATACC GGATCTTCAA CTGCGACGGC GGCGAAGTCG AGCACTGCGG CAACGGCGCG CGCTGCTTCG TCAAGTTCGT CCGCGACCAC GGGCTCACCG GCAAGGCGAG CGTGCGCGTC GAGGTGAAGC ACGGCGTGAT CACGCTGACG ATGCAGGACA ACGGCGAGGT CGTCGTCGAC ATGGGCGCGC CCGTGTTCGA GCCGGCGCGC GTGCCGTTCG ACGCGAGCGG CCTCGACGGC CGCCGCGAGG GCGCCGACAC GCTCTGGCCG CTGCCCGTGA ACGGCGTGAC GCGCTGGATC TCGGTCGTGT CGATGGGCAA TCCGCACGCG GTGCAGATCG TCGACGACGC CGAGGCGTTC GCGGTGCGCG TCGACGGGCC GGCGATCGAG CGCGATCCGC GTTTCCCGCA GCGCGTGAAC GCGGGCTTCA TGCAGATCGT GTCGCGTCAC GAAGTGAACC TGCGCGTCTA CGAGCGCGGC GCGGGCGAAA CGCTCGCGTG CGGCACGGGC GCGTGCGCGG CCGTCGCGGC CGGCATCCGG CGCGGGCGAC TCGATTCGCC CGTCACGGTC CATACGCACG GCGGCACGCT GACGATCTCG TGGAACGGCG CGTGCGACGA GCGCGCGCCG CTCATGATGG CCGGCCCCGC GACCACCGTC TTCGAAGGCG TGATCGAGCT GCCCGCCTGA
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Protein sequence | MKLSFTKMHG AGNDFVVLDG YTRALPPLTG AQVRALADRH FGIGADQLLL VEKPTVDGAD FKYRIFNCDG GEVEHCGNGA RCFVKFVRDH GLTGKASVRV EVKHGVITLT MQDNGEVVVD MGAPVFEPAR VPFDASGLDG RREGADTLWP LPVNGVTRWI SVVSMGNPHA VQIVDDAEAF AVRVDGPAIE RDPRFPQRVN AGFMQIVSRH EVNLRVYERG AGETLACGTG ACAAVAAGIR RGRLDSPVTV HTHGGTLTIS WNGACDERAP LMMAGPATTV FEGVIELPA
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