Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_A1780 |
Symbol | vacJ |
ID | 4790952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008836 |
Strand | + |
Start bp | 1832091 |
End bp | 1833050 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | lipoprotein VacJ |
Protein accession | YP_001027759 |
Protein GI | 124383535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.259856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACGA TCCGCATCAG CCCAGCGGTG CTGGCGATCA CGGCCGCCGC GGCATTGAGC GGTTGCGCGA CAGTCCAGAC GCCGACCAAG GGCGACCCGT TCGAAGGCTT CAACCGGACG ATGTACACGT TCAACGACAA GGTCGACCAG TACGCGCTCA AGCCGGTCGC GCGCGGCTAT CAGTGGGCGG TGCCGCAGCC GATGCGCGAC AGCGTGACGA ACTTCTTCTC GAACATCGGC GACGTCTACA TCGCCGCGAA CAACCTCGTG CAGCTGAAGA TCGCCGACGG CGTCGGCGAC ATCATGCGGA TCGTGATCAA CACGGTGTTC GGCGTGGGCG GCCTGTTCGA CGTCGCGACG CTCGCGAAGC TGCCGAAACA CGCGAACGAC TTCGGCGTGA CGCTCGGCCA CTACGGCGTG CCGAGCGGCC CGTACCTCGT GCTGCCGCTG CTCGGCCCGA GCACCGTGCG CGACACGGCG GGCCTCGCCG TCGACTACGC GGGCAACCCG CTTACCTATG TACGGCCCGA CGGCGTGAGC TGGGGCCTGT TCGGGCTGAA CCTCGTGAAC ACGCGCGCGA ACCTGCTCGG CGCGGGCGAC GTGCTCGAGG CAGCCGCGAT CGACAAGTAT TCGTTCGTGA GCAACGCGTA CCTGCAGCGC CGCCAGGCAC TGATCGGCGG CGCCACGGGC GCGCAGTCGA ACCTGCCGGA TTACGGCAAC GAGGCGCCGC CGCCGAATTA CGAGATGCCG GAAGAGGGCG CCGCGGCGCC CGCGAGCGGC GCGGCATCGG CGCCGGCCGC CGCTTCCGCG CCCACGGCGG CGTCCGGTGC GGCGCCGGGC GCGGCCGAGC CCGCATCGGC CGCGGCGCCG AATCCGAGCA GCGCGACGAA CGTGCCCGCT CAGCAGGTCG TGCCGCCGTC GCCGGGCGGC ATCCGTTTCC CGAGCATCCG GCTGCACTGA
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Protein sequence | MQTIRISPAV LAITAAAALS GCATVQTPTK GDPFEGFNRT MYTFNDKVDQ YALKPVARGY QWAVPQPMRD SVTNFFSNIG DVYIAANNLV QLKIADGVGD IMRIVINTVF GVGGLFDVAT LAKLPKHAND FGVTLGHYGV PSGPYLVLPL LGPSTVRDTA GLAVDYAGNP LTYVRPDGVS WGLFGLNLVN TRANLLGAGD VLEAAAIDKY SFVSNAYLQR RQALIGGATG AQSNLPDYGN EAPPPNYEMP EEGAAAPASG AASAPAAASA PTAASGAAPG AAEPASAAAP NPSSATNVPA QQVVPPSPGG IRFPSIRLH
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