Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_A1514 |
Symbol | rpoN |
ID | 4793881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008836 |
Strand | - |
Start bp | 1546918 |
End bp | 1548459 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_001027496 |
Protein GI | 124384083 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAACT TCCGGTATGA ATCCCTTTTT GCCATGAAAG CCAGTCTTCA ACTTCGCCTG TCGCAGCATC TCGCGCTCAC GCCCCAGCTT CAGCAGTCGA TCCGGCTGTT GCAACTGTCG ACGCTCGAAC TGCAACAGGA AGTCGCGACG GCGATCGCGC AGAACCCGCT GCTCGAGAAC GACGATGACT GGATCGCGAG CCCGTTGCGC GTCGCGGCCG ACGGCTCGGT GATCGCGCAG ACGCCCGCGT CGTCCGCGCC CGAGCCGATG GCGGGCGCGC CGAACGGCAC GGCTGCGACC AATGAGCGCA CCGAGCGCGA CGAAACCGCC GGCGTCGACG AATACGACAG CTATTCGGCC GACGGCGGCG ACGCGAGCCA GTGGAACCTC GACGACTTCG GCCGCTCGCC CGCCGCGTCC GACGACGACG ATCTGCCGCC GATGCAGATC CACGAGACGT CGACGTCGCT GCGCGATCAT CTGATGGCGC AGTTGCGCGT CACGCAGGCG AGCCCGCGCG ATCGCGCGCT CGTCACGTTC CTGATCGAAT CGCTCGACGA CGACGGCTAC CTGAGCGCGT CGCTCGAGGA AGTGCTCGCC GATCTGCCGG CGGAGCTCGA GGTCGACGTC GACGAACTGA ACGCGGCGCT CGCGCTCGTG CACAGCTTCG ATCCGGCGGG CGTCGGCGCG CGCTCCGCGT CCGAATGCCT GAAGCTGCAG TTGCTGCGCC TGGATCCGTC CCCGACGCGC GCGCTCGCGC TCGATATCGT GTCGCAGCAT CTGGAGCTGC TCGCCGCGCG CGATTTCACG CGCCTGCGCA AGCAACTGAA GGCGACCGAC GACGCGCTGC GCGACGCGCA CGCGCTGATC CGCTCGCTCG AGCCGTTCCC CGGCGCGGCG TACGGCAAGG CCGAAGCCGA TTACGTGGTG CCCGACATCA TCGTGAAGAA GGCCGGCCAA AACTGGCAGG CGGAACTCAA TCCGGAAGTG GTGCCGAAGC TGCGGATCAA CAATCTTTAC GCGAACATCC TGCGCAACAG CCGGGGCGAT CCGAGCGCGG GATCGCTGAA GCAACAGCTT CAGGAAGCGC GCTGGCTGAT CAAGAACATT CAGCAGCGGT TCGAGACGAT CCTGCGCGTC GCGCAGGCGA TTGTCGAGCG TCAGAAGAAT TTCTTCGCGC ACGGCGAAAT TGCGATGCGC CCCTTGGTTT TGCGGGAAAT AGCTGATACG CTGGGCCTAC ACGAGTCGAC TGTCTCCCGT GTGACAACCG GCAAGTACAT GCTGACCCCG TTCGGCACAC TTGAATTTAA GTACTTCTTC GGATCGCACG TATCGACAGA CACCGGAGGT GCCGCGTCGT CGACAGCGAT CCGCGCCCTC ATCAAACAAC TGATAGGAGC CGAAGACCCC AAATCCCCTC TTTCGGACAG TCGCATAGCC GAGCTGCTAG CGGAACAAGG GTTCGTGGTC GCGCGCCGCA CGGTTGCCAA ATATCGCGAA GCCCTCAAGA TCCCGGCGGT GAATCTGCGC AAGTCTCTGT AG
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Protein sequence | MANFRYESLF AMKASLQLRL SQHLALTPQL QQSIRLLQLS TLELQQEVAT AIAQNPLLEN DDDWIASPLR VAADGSVIAQ TPASSAPEPM AGAPNGTAAT NERTERDETA GVDEYDSYSA DGGDASQWNL DDFGRSPAAS DDDDLPPMQI HETSTSLRDH LMAQLRVTQA SPRDRALVTF LIESLDDDGY LSASLEEVLA DLPAELEVDV DELNAALALV HSFDPAGVGA RSASECLKLQ LLRLDPSPTR ALALDIVSQH LELLAARDFT RLRKQLKATD DALRDAHALI RSLEPFPGAA YGKAEADYVV PDIIVKKAGQ NWQAELNPEV VPKLRINNLY ANILRNSRGD PSAGSLKQQL QEARWLIKNI QQRFETILRV AQAIVERQKN FFAHGEIAMR PLVLREIADT LGLHESTVSR VTTGKYMLTP FGTLEFKYFF GSHVSTDTGG AASSTAIRAL IKQLIGAEDP KSPLSDSRIA ELLAEQGFVV ARRTVAKYRE ALKIPAVNLR KSL
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