| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_A1154 |
|---|
| Symbol | pqiB |
|---|
| ID | 4790816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008836 |
|---|
| Strand | - |
|---|
| Start bp | 1181174 |
|---|
| End bp | 1182829 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | paraquat-inducible protein B |
|---|
| Protein accession | YP_001027139 |
|---|
| Protein GI | 124385932 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAC CGCAAGGCCC GCAACACGAC CCGAACGCGG CCCCTCCCAC CCCGCCCGGC
GGCGAGCCGC CCGTACTGCC CGAGCCCGTG ATCACGCGGC GCTCCGGGTG GCTGCCGTCG
CTCGTGTGGC TCGTGCCGCT CGTCGCCGCG CTGATCGGCA TCGGGCTCGT CGTCAAATCG
GTGCTCGAAC GCGGGCCCGA GATCACGATC AGCTTCAAGA GCGCCGAGGG CCTCGAGCCC
GGCAAGACGC AGGTCAAGTA CAAGGACGTC GAGATCGGGA TGGTCGAGAC GATCAAGCTG
TCGAAGGATC TGTCGCACGT GCTCGTCGAA GTGCAACTGA AGAAGGAGGC CGAGGACTTC
GCGGTGAAAG GCACGCGCTT CTGGGTCGTG CGGCCGCGGA TCGGCGCGAC GGGCGTGTCC
GGGCTCGGCA CGCTGCTGTC CGGCGCGTAC ATCGGCGTCG ACGCGGGCTG CTCGGACGAG
ACCGAGAAGT CGTTCACCGG GCTCGAGACG CCGCCCGCCG TCACGGGCGA CCAGAAGGGC
ACGCAATACG TGCTGCGCGG CGATTCGCTC GGCTCGATCG ACATCGGCTC GCCGGTGTAC
TACCGGCGCG TGCAGGTGGG CCAGGTCGTC GGCTTCTCGC TCGACAAGGA CGGCACGGGC
GTCACGTTCC GCGTGTTCGT CAATGCGCCT TACGACCAGT ACGTCGGCCT GAACTCGCGC
TGGTGGCAGG CGAGCGGCGT CGATCTGCGG CTCGATTCGA GCGGCTTCAA GCTGAACACG
CAGTCGCTCG CGACGGTGAT CCTCGGCGGC ATTGCGTTCC AGTCGCCGCC GAATCAGGCG
GCCGGCCCGC CCGCGCCGAA CAACATGACG TTCCGCCTGG GCGCCGACGA AGGCGACGCG
ATGCGCGAGC CGGACGGCGA GCCGGTGCAG GTCGTGATGA ACTTCAACCA GTCGCTGCGC
GGGCTGTCGG TCGGCGCGCC CGTCGATTTC CGCGGCATCG TGCTCGGCCA GGTGACGAAC
ATCGGCATCG ATTTCGATCC GAAGACGAAG AATTTCACGA TGCCGGTGAC GATGAACGTC
TACCCCGACC GGCTCGGCCG CAAGTTCCGC GAGGCATCGC AGGATAAGGG CTACGCGGCG
CGGCGCGAGG TGCTGTCGCG GCTCGTCCAG CACGGGCTGC GCGGCCAGTT GCGCACGGGC
AACCTGCTGA CGAGCCAGTT GTACGTCGCA CTCGACTTCT TCCCGAAGGC GCCGCCCGTG
AAGATCGATC TCGCCCGCGA GCCGGTCGAA CTGCCGACCG TGCCGAACAC GCTCGACGAG
CTGCAGTTGC AGGTGGCCGA CATCGCGAAG AAGCTCGACA AGGTGCCGTT CGACCAGATC
GGCGCGAACC TGAACAGCGC GCTCGCGAAC GCGGACAAGC TGTTCAAGCG GCTCGACACC
GAGATCGCGC CCGAGGCGCG CGACACGCTG TCCGCCGCGA AGCAGACGTT CACGACCGCG
GAGGCGACCT TGCAGCAGGA TTCGCCGCTG CAATCGGACG TGCGCGGCGC GCTCAAGGAG
CTCACGCGCA CGCTGCAATC GCTGAACGCG CTCGCCGACT ACCTCGAGCG GCATCCCGAA
TCGCTGCTGA AAGGCAAACC AGGAGATCAG AAATGA
|
|---|
| Protein sequence | MNRPQGPQHD PNAAPPTPPG GEPPVLPEPV ITRRSGWLPS LVWLVPLVAA LIGIGLVVKS
VLERGPEITI SFKSAEGLEP GKTQVKYKDV EIGMVETIKL SKDLSHVLVE VQLKKEAEDF
AVKGTRFWVV RPRIGATGVS GLGTLLSGAY IGVDAGCSDE TEKSFTGLET PPAVTGDQKG
TQYVLRGDSL GSIDIGSPVY YRRVQVGQVV GFSLDKDGTG VTFRVFVNAP YDQYVGLNSR
WWQASGVDLR LDSSGFKLNT QSLATVILGG IAFQSPPNQA AGPPAPNNMT FRLGADEGDA
MREPDGEPVQ VVMNFNQSLR GLSVGAPVDF RGIVLGQVTN IGIDFDPKTK NFTMPVTMNV
YPDRLGRKFR EASQDKGYAA RREVLSRLVQ HGLRGQLRTG NLLTSQLYVA LDFFPKAPPV
KIDLAREPVE LPTVPNTLDE LQLQVADIAK KLDKVPFDQI GANLNSALAN ADKLFKRLDT
EIAPEARDTL SAAKQTFTTA EATLQQDSPL QSDVRGALKE LTRTLQSLNA LADYLERHPE
SLLKGKPGDQ K
|
|---|
| |