| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_A0902 |
|---|
| Symbol | |
|---|
| ID | 4792717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008836 |
|---|
| Strand | + |
|---|
| Start bp | 922179 |
|---|
| End bp | 924002 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | sigma-54 dependent DNA-binding transcriptional regulator |
|---|
| Protein accession | YP_001026892 |
|---|
| Protein GI | 124383368 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGCG CAATGCGCGC CGCATGCATC GTCGCGCGCA CGTCCGTCCC CCGAACGATT
GCCCACGCAT CGCCACGACG CCGGCGCGGC TCGCTCGCCG AACGACTTCC TCGCCGCCCA
GTCGCGTCGG ATGCATCGGT CGCATCGGTC GCATCGGTCG CATCGGTCGC ATCGGTCGCA
TCGGTCGCAT CGGTCGCGTC GGTCGCATCG GTTGCATCGA TCGCGTCGGT CGCGTCGGTC
GCATCGCCCC CCAGTCGCCC AACTCGCATC GGCCGCACCC TGCGCGCCAG CGCGCCCACC
TCGAACTCCG CTCGCCGCGC TCGCCCCGAC ACGTTCCGAA CAACATCCCA GCTGAGGTGC
ATCGTGCCAG ACTTCCGCCC CCCTTCCGAT TGCGCGCCGC CCGGCCATGC CGCGCAGCGC
TCCGCCTCAC CGGCCGATGC GGCCGCGCGC CAGCTCGTCT ACCTGTCGCG CACGCCCGAC
ACGACGCTCA TCGCGCACCT GCGCGCACGA CGCTGGAACG TGCACGTCGC GCGCTCCGCG
AACGAAGCGG CGCGGCGCGT GAAGCCGAAT CAGCCGCAGG CCGGCATCGC CGATCTCGAC
GGCTTCGCGC CGCGCGAGTT GCCGACGCTC GAAGCGGTGT TGCGCCAGCA GCAGGTCGGC
TGGATCGCGC TCGCGGGTGA CACGCGCATC AACGATCCCG ACGTGCGCCG GCTGATTCGC
CAGTACTGCT TCGACTACAT GCAGGGCCTG CCCCCGCACG AGACGATTGA TTATCTCGTC
GGCCATGCCT ACGGGATGGT CGCGCTGTGC GATCTCGACG TCACGGCGGG CGCCGCCGCG
ACGGGCGACG AGATGGTGGG CGCGTGCGAC GCGATGCAGC AGTTGTTCCG GACGATCCGC
AAGGTCGCCG CGACCGACGC GACCGTGTTC ATCTCCGGCG AATCGGGCAC CGGCAAGGAG
CTGACCGCGC TCGCGATCCA CGAGCGCTCC GAGCGCCGCA AGGCGCCGTT CGTCGCGATC
AACTGCGGCG CGATTCCGAA TCATCTGCTG CAATCCGAAC TGTTCGGCTA CGAGCGCGGC
GCATTCACGG GCGCGAGCCA GCGCAAGGTC GGCCGTGTCG AAGCGGCGGA CGGCGGCACG
CTGTTTCTCG ACGAAATCGG CGACATGCCG CTCGAAAGCC AGGCGAGCAT GCTGCGCTTC
CTGCAGGAAG GCAAGATCGA ACGGCTCGGC GGGCACGAGT CGATTCCGGT CGACGTGCGG
ATCATCTCCG CGACGCACGT CGATCTCGAC GCGGCGATGC GCGAAGGCCG CTTTCGCGAC
GACCTGTACC ACCGGCTGTG CGTGCTGAAG CTCGACGAGC CGCCGTTGCG CGCGCGCGGC
AAGGACATCG AAATCCTCGC GCATCACATC CTGCATCAGT TCAGGAGCGA CGGCGCGCGC
CGCATTCACG GCTTCACGTC GTGCGCGATC GAAGCGATGT ACAACTATCA CTGGCCCGGC
AACGTGCGCG AGCTGATCAA CCGGATCCGG CGCGCGATCG TGATGTCGGA CAGCCGGCAA
CTGTCGGCCG CCGACCTCGA TCTCGCGCCG TTCGCCGCGC GCCAGGCGAC GACGCTCGCC
GAAGCGCGCG AGCGCGCCGA GCGCCGGACG ATCGAGGCGT CGCTGCTGCG GCATCGCAAC
CATCTGACCG AAGCGGCGGC GGAACTCGGC GTGTCGCGCG CGACGCTGTA TCGGCTGATG
GTGTCGCACG GCCTGCGCGA ACTGTCGTGG GGCGCGCAAC GCGCCGGCGC GAGCGACGCG
GACAACGAGG CCGGGCCCGC ATGA
|
|---|
| Protein sequence | MRRAMRAACI VARTSVPRTI AHASPRRRRG SLAERLPRRP VASDASVASV ASVASVASVA
SVASVASVAS VASIASVASV ASPPSRPTRI GRTLRASAPT SNSARRARPD TFRTTSQLRC
IVPDFRPPSD CAPPGHAAQR SASPADAAAR QLVYLSRTPD TTLIAHLRAR RWNVHVARSA
NEAARRVKPN QPQAGIADLD GFAPRELPTL EAVLRQQQVG WIALAGDTRI NDPDVRRLIR
QYCFDYMQGL PPHETIDYLV GHAYGMVALC DLDVTAGAAA TGDEMVGACD AMQQLFRTIR
KVAATDATVF ISGESGTGKE LTALAIHERS ERRKAPFVAI NCGAIPNHLL QSELFGYERG
AFTGASQRKV GRVEAADGGT LFLDEIGDMP LESQASMLRF LQEGKIERLG GHESIPVDVR
IISATHVDLD AAMREGRFRD DLYHRLCVLK LDEPPLRARG KDIEILAHHI LHQFRSDGAR
RIHGFTSCAI EAMYNYHWPG NVRELINRIR RAIVMSDSRQ LSAADLDLAP FAARQATTLA
EARERAERRT IEASLLRHRN HLTEAAAELG VSRATLYRLM VSHGLRELSW GAQRAGASDA
DNEAGPA
|
|---|
| |