| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_A0645 |
|---|
| Symbol | |
|---|
| ID | 4793484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008836 |
|---|
| Strand | + |
|---|
| Start bp | 664669 |
|---|
| End bp | 666033 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | GGDEF domain-containing protein |
|---|
| Protein accession | YP_001026640 |
|---|
| Protein GI | 124384520 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGCA CGATCGCCCG GCTCTACACC GCATGCCTGC TGATCGGCTT CGCGCTCGTG
CCGGCGTTCC TGATCGCCTA TGTGCGGTTC TTCATCGATC CGCGGCTCGT CTTCGAGAAC
CATCAGTTCC ACGAACTGGC GATCGCCGCC GCGACGCTCG AGGGGCTGTT CGTCACCTAC
GTCACATGGC GCTGCTATCT GGCGTCGGGC GAGCCGCTGC TGCGCTGGCT CACGCTCGGC
TTCCTCGGCT TCGCGCTGAT CTATTCGCTG CACGGCGCGT TCACCGGCAT GGCGCACCAG
AACATCTGGC TGTTCCTGCT GTACGGGCCC GCATCGCGCC TCGTGATGTC GATCCTGCTG
CTCGTCGGGC AACTGTCGTA CTTCCGCGAC GCCGATCCAC CGGAGCGCCG CACGCATCTG
TCGATGTGGC TGCCGTGGAT CGCCGGCTAC GTCGTCGTGT GCTTCGCCGT GGCCGCGATC
GCGTATTCGC CGATCGCCGG CCATCTGTGG ACGCGCGCAT CGATGGAGGG CGGCGCGATG
ATCGTGTCGC TCGTCAACGT CGCGCTGCTG CTCGTGCGGC GCATCCGCAC GCCGCTGATG
CTCGTCTACG GCATCTCGGT GACGTCGTTC GCGCTGTCGT CGATCGCGTT CATTCTCGGC
AAGCCGTGGA ATCACATGTG GTGGCTCGCG CACGCGGTCT TCGCGGGCGG CTTCTTCATG
CTGAGCTTCG GCGTCGTGCA GGCGCTGATG ACGACCCGCT CGTTCGCGAC CGTCTACAGC
CAGCAGGACT TGATGGCGCG GCTCGCCGAA TCGATGGCGC GCACCGAGGG CGTGCTGCAG
GAGCTCAAGC GCACCAATCA GAAGCTCGAG CACCTCGCGA CCACCGATCC GCTGACGGGC
GCGTCCAACC GGCGCAAGTT CATCGAGCAG ATGCAATCGG AGATCGCGCG CGCGAAACGC
GACGGCACCG CGTTCTCGCT GCTCGCGCTC GATCTCGACA ACTTCAAGAC GATCAACGAC
AACTACGGCC ATCAGGTCGG CGACGTCGTG CTGCGCAATT TCGTGCGCCA GTGCCTCGCC
GCGATTCGCC CTTACGACCA CATCGCGCGC GTCGGCGGCG AGGAATTCAT GGTGCTGCTG
CCGCGCATGC TCGCCGACAC GGCGAGCGGC ATCGCCGAGC GGGTGCGGAC CACGATCGCG
AACGCATCGT TCGGCATCGA CGGCAAGCAC ACGCCCGTGA CCGTGAGCAT CGGCGTGTCG
CAGTACGGGC GCGACGGCGA CACCGTCGAC GAAATCCTGA GCGCCGCCGA CAAGCTGCTC
TATCGCGCGA AGAACGAGGG GCGCAATCGC GTCGTCGCGT CGTAG
|
|---|
| Protein sequence | MIGTIARLYT ACLLIGFALV PAFLIAYVRF FIDPRLVFEN HQFHELAIAA ATLEGLFVTY
VTWRCYLASG EPLLRWLTLG FLGFALIYSL HGAFTGMAHQ NIWLFLLYGP ASRLVMSILL
LVGQLSYFRD ADPPERRTHL SMWLPWIAGY VVVCFAVAAI AYSPIAGHLW TRASMEGGAM
IVSLVNVALL LVRRIRTPLM LVYGISVTSF ALSSIAFILG KPWNHMWWLA HAVFAGGFFM
LSFGVVQALM TTRSFATVYS QQDLMARLAE SMARTEGVLQ ELKRTNQKLE HLATTDPLTG
ASNRRKFIEQ MQSEIARAKR DGTAFSLLAL DLDNFKTIND NYGHQVGDVV LRNFVRQCLA
AIRPYDHIAR VGGEEFMVLL PRMLADTASG IAERVRTTIA NASFGIDGKH TPVTVSIGVS
QYGRDGDTVD EILSAADKLL YRAKNEGRNR VVAS
|
|---|
| |