| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_A0533 |
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| Symbol | |
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| ID | 4791460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10229 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008836 |
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| Strand | + |
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| Start bp | 549773 |
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| End bp | 553120 |
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| Gene Length | 3348 bp |
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| Protein Length | 1115 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | alpha amylase family protein |
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| Protein accession | YP_001026531 |
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| Protein GI | 124386041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCATGCGT GGCCGCCGCT GTTCGAGCGC GTCGCCGCAT GGGGCTTCGA TCATGTGCTG
ATCGGCGGCC TCTGGGCGGC GAGCCGCCGC GGCTATCCGC GCCACGTCGC GGACCCCGAT
CGCCCCGCCG AATCGTTCGC GACGTCGCTC GACGCGACGA GCGCGCTCGC CCGCCTGTCG
GACAGCGCGC GCGAGCACGG GCTGCGCATC GCCGTCGAAG TCGTCGTCGA CCGCGTCGCG
CGCGAGCACC CGCTGCACGA CGCACACCGC GACTGGTACG TCGTCGACGA ACGCGACGAC
GCGCTGATCG ATCCGCGCAC CGCGGCGCTC GCGCACGACG TCGCGCATGC GAACGTCGGC
AGCGCGGCCG CGCTCGACGC GCTCGCCGAC TGGTGGCGCG CCCGGCTCGG CGCGCTGGCC
GACGCGGGCG CGGCGGCCTT TCTCGTCGAC GCGCCGCAGC GGATGCCGGC GCACTGGTGG
GCCGCGCTGC TCCGCGCGCT GCGGCAGGCC CGCGCGGATC TGCCGGTGAT CGCCGGCGTG
CCGGGCCGGG AGCGCGAGGC GCTCGCGCAG CTCGCCTGCG CCGGCTTCGA CGCGGCGTTC
TCGTCGCTGC GCTGGTGGGA CCTGCGCGCG CCGTGGTTCG TCGAAGAACA CCGGCTGCTG
CGGCGCGTCG GCGCGCCGAT CGCGTTCCCG GACGCGTTCG ACGGCCCGCG GCTCGCGCAC
GATTGGCGGC AGGCCGCGCC CGAGACGATC GAGCGCGCGC ATCGCCGCGC GCTGTGGACC
GCCGCCGCGC TCGGCACTGG CTGGCTCGTG CCGATGGGCT TCGAGCGCGG CGTGGCCGTC
GAACTGATGG CGCGCGAGCC GCGAGCCGAC GCGTACCGCG CCGCGCTCGA CAGCGCGCCG
TTCGACTTGT CGGGCGCGAT CGCCGAAGCG AACGCGCTGC GCCGCGCGGC GCCCGCGCTG
CGCGGCAACG GCGAGATCGC GCAGCTGACG GGCGCCGATG CGCCGGCGAC CGTGCTGCTG
CGCGGCGCGC GCACCGCGCT CGAATACGAC GACGAGGCTG CGCTGATCGC GGTCAATCCG
GACCTCGCGC ACCCCGCGGC GATCGCGCCG TGCGCGGCGC TCGCCGGCGT GCCGGGCGGC
TTCACGCGCT TCGCGCCGTT CGCCGACGGC CGCCGCCCGC GTATGGGCGC GCTCGAACCG
TTCGCGCTCG CCGCCGGTGC CTGCACGTTG CTGCGCGCGC AACGCGCGCG CCCGGTCACG
ACGGCCCCCG CCGAGGATCG GCGCGGCAAT CGGCCCGGCA CCCGTGCGTC GGTCACGGCC
GCGCTCGCCG GCGAGCGCAT CGCGATCGAG CGCATCGAGC CCGTCGTCGA CGATGGCCGC
TTCGCCGTCA AGCGCGTGAT CGGCGAGCGG CTCGCCGTGC GCGCGGCGAT TTTCGCCGAC
GGTCACGCAC GCCTCGCGGC GGCCGTCCAA TGGCGCGCCG CGGACGAGAA CGGCTGGCAC
GAGGCCCGAT GCGCCGCCGA AGGCAACGAT GCGTGGCGAG CGGACATTCC GCTCGAACGG
CTCGGCCGGC ATCTGTTCCG CGTGATCGCG TGGCGCGACG ATTGGGCGAC GCTCGTCGAC
GAGATCGGCA AGAAGCACGC GGCGGGTCAG GCGGTGGCGC TCGAGTTGGA AGAAGCGCGG
CGGCTCGCCG CCGACGTGCT CGCGCGCGCG CCGGAGGCGA ACCCCGCCGC GCTCGCCGTG
CTGCGCGAAT TCGCGGCGGC CCTCGACGCC GCGCCGCCCG ACCAGCGGCT CGCGCTGATC
GGCGCGCCGC ACGTCGCCGA CGCGTTCGCG GCGCTGCGCG AGCGAGCGTT CGCCACGCGC
GACGCGCCCG TCTTCCCGGT CGACGTCGAG CGGCGCGCGG CCCGCTTCGC CAGCTGGTAC
GAGATGTTTC CCCGCTCGGC GAGCGACGAT GTCCGCCGCC ACGGCACGTT CGACGACGTC
GTCGCGCATC TGCCGCGCAT CCGCGACATG GGCTTCGACG TGCTGTACTT CCCGCCGATC
CATCCGATCG GCACGACCGC GCGCAAGGGC CGCAACAACA GCCTGCAGGC CGCGCCCGAC
GACGTCGGCA GTCCGTATGC GATCGGCTCG CCGGCGGGCG GCCACACCGC CGTCCATCCG
CAGCTCGGCT CGCTCGATGC GTTCCGCCAG CTCGTCGCTG CGGCGCGCGC GCACGATCTC
GAGATCGCGC TCGACTTCGC GGTTCAATGC TCGCCGGACC ATCCGTGGCT CACCGAGCAT
CCCGGCTGGT TCGCGTGGCG GCCGGACGGC TCGCTGCGCT ACGCGGAAAA TCCGCCGAAG
CGCTATCAGG ACATCGTGAA TCCCGACTTC TACGCGCGCG ACGCGATGCC CGCGCTGTGG
ATCGCGCTGC GCGACGTCGT GCTGTTCTGG ATCGACGCGG GCGTGCGCAT CTTCCGCGTC
GACAATCCGC ACACGAAGCC GCTGCCGTTC TGGGCATGGA TGATCGCCGA CGTGCGCGCG
CGACACCCGG ACACGGTGTT CCTGTCCGAG GCGTTCACGC GGCCGAGCAT GATGTACCGG
CTCGCGAAGC TCGGCTTCTC GCAGTCGTAC ACCTACTTCA CGTGGCGCGA GTCGAAGCGC
GAGTTCATCG ATTATCTGAC CGAGCTCGCC GACGGGCCGG CGCGCGAATA CTTCCGGCCG
AACTTCTTCG TCAACACGCC GGACATCAAT CCGCGCCACC TGCAGCAGGC GCCGCGCACG
CAGTTCGTGA TCCGCGCGGC GCTCGCCGCG ACGCTCTCGG GCCTCTGGGG AATGTATTCG
GGCTTCGAGC TGTGCGAGTC CGACGCGCTG CCCGACAGCG AGGAATATCG CGACGCGGAG
AAATACGAGC TGCGCGCGCG CGACTGGCGG CGGCCCGGCC ACATCGGCGA CGAAATCGCG
CGGCTCAACC GCGCGCGGCG CGACAACCCG GCGCTGCAGA CGCATCTCGG CATCCGCTTC
GCGCACGCGC CGAACGACGC GGTGCTGGTG TTCTCGAAGG CGACGCCCGC GCACGACAAC
GTCGTCGTCG TCGCGATCAG CCTCGATCCG TGGCATCCGC AGGCCACCGA TTTCACGCTC
GACGCAGCGC TGTACCGCGG CTGGGGCATC GCCGACGGCG AGCGGCTCGT CGCCGTCGAT
CAGACGGCCG ACCACGTCGA AACCTGGCAC GGGCGCCGGC ATTACGTCGC GCTCGACCCG
CACGTGCGCC CGTTCGCGAT CTGGCGCGTC GCGCCCGCGG CGGGCGTCGC GCGCGGCGCG
CGCGACGACG CGCGCGACGT CCCCGCACAG GAGGTGCACG AACGATGA
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| Protein sequence | MHAWPPLFER VAAWGFDHVL IGGLWAASRR GYPRHVADPD RPAESFATSL DATSALARLS
DSAREHGLRI AVEVVVDRVA REHPLHDAHR DWYVVDERDD ALIDPRTAAL AHDVAHANVG
SAAALDALAD WWRARLGALA DAGAAAFLVD APQRMPAHWW AALLRALRQA RADLPVIAGV
PGREREALAQ LACAGFDAAF SSLRWWDLRA PWFVEEHRLL RRVGAPIAFP DAFDGPRLAH
DWRQAAPETI ERAHRRALWT AAALGTGWLV PMGFERGVAV ELMAREPRAD AYRAALDSAP
FDLSGAIAEA NALRRAAPAL RGNGEIAQLT GADAPATVLL RGARTALEYD DEAALIAVNP
DLAHPAAIAP CAALAGVPGG FTRFAPFADG RRPRMGALEP FALAAGACTL LRAQRARPVT
TAPAEDRRGN RPGTRASVTA ALAGERIAIE RIEPVVDDGR FAVKRVIGER LAVRAAIFAD
GHARLAAAVQ WRAADENGWH EARCAAEGND AWRADIPLER LGRHLFRVIA WRDDWATLVD
EIGKKHAAGQ AVALELEEAR RLAADVLARA PEANPAALAV LREFAAALDA APPDQRLALI
GAPHVADAFA ALRERAFATR DAPVFPVDVE RRAARFASWY EMFPRSASDD VRRHGTFDDV
VAHLPRIRDM GFDVLYFPPI HPIGTTARKG RNNSLQAAPD DVGSPYAIGS PAGGHTAVHP
QLGSLDAFRQ LVAAARAHDL EIALDFAVQC SPDHPWLTEH PGWFAWRPDG SLRYAENPPK
RYQDIVNPDF YARDAMPALW IALRDVVLFW IDAGVRIFRV DNPHTKPLPF WAWMIADVRA
RHPDTVFLSE AFTRPSMMYR LAKLGFSQSY TYFTWRESKR EFIDYLTELA DGPAREYFRP
NFFVNTPDIN PRHLQQAPRT QFVIRAALAA TLSGLWGMYS GFELCESDAL PDSEEYRDAE
KYELRARDWR RPGHIGDEIA RLNRARRDNP ALQTHLGIRF AHAPNDAVLV FSKATPAHDN
VVVVAISLDP WHPQATDFTL DAALYRGWGI ADGERLVAVD QTADHVETWH GRRHYVALDP
HVRPFAIWRV APAAGVARGA RDDARDVPAQ EVHER
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