Gene BMA10229_1957 details

Gene Information

• Locus tag: BMA10229_1957
• Symbol: sctR
• ID: 4788816
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10229
• Kingdom: Bacteria
• Replicon accession: NC_008835
• Strand: +
• Start bp: 2020039
• End bp: 2020689
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 65%
• Product: type III secretion system protein
• Protein accession: YP_001025753
• Protein GI: 124381437

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTCAGT TTAACGACAT CACCGGCCTC TTGATCGCCG TGCTCGTGAT GAGCATGGTG 
CCGTTCATCG CGATGGTGGT CACCTCGTAC GCGAAGATCG TCGTCGTGCT CGGCCTGCTG 
CGCAACGCGC TCGGCGTGCA GCAGGTGCCG CCGAACATGG TGCTCAACGG CATCGCGATT 
CTCGTGTCGC TGTACATCAT GGCGCCGATC GGCTTCGCCG CGCAGCAGCA GCTTCAGGGG 
CAGGCGCTGT CGCCGCAGCC GACGCAGGCG ATGCTGCAGG CGTTCGGCGC GGCGAAGGAG 
CCGTTTCGCC GGTTCCTCGC CGCGCACTCG CGCGAGCGCG AGAAGCGTTT CTTCCTGCGC 
TCCGCGTCGG TGATCTGGCC GCAGGCCGCG GCCGCGCAAC TGCGCGAGGA CGACCTGATC 
GTCCTCGCGC CCGCGTTCAC GCTCGCGCAG ATGACCGATG CGTTCCGCAT CGGCTTCATC 
CTCTACATCG CGTTCATCAT CGTCGATCTC GTGATCGCGA ACGTGCTGAT GTCGATGGGG 
ATGAACCAGG TGCAGCCGAC CAACGTCGCG ATCCCGTTCA AGCTGATGCT GTTCGTCGTG 
ATGGACGGCT GGTCGACGCT CGTGCACGGC CTCGTGCTGA CCTATTCCTG A 

 

Protein sequence

MVQFNDITGL LIAVLVMSMV PFIAMVVTSY AKIVVVLGLL RNALGVQQVP PNMVLNGIAI 
LVSLYIMAPI GFAAQQQLQG QALSPQPTQA MLQAFGAAKE PFRRFLAAHS REREKRFFLR 
SASVIWPQAA AAQLREDDLI VLAPAFTLAQ MTDAFRIGFI LYIAFIIVDL VIANVLMSMG 
MNQVQPTNVA IPFKLMLFVV MDGWSTLVHG LVLTYS