Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_1893 |
Symbol | |
ID | 4790417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008835 |
Strand | + |
Start bp | 1941231 |
End bp | 1943141 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | amino acid ABC transporter, permease/ATP-binding protein |
Protein accession | YP_001025690 |
Protein GI | 124382596 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGATA TCACTCACGC TGTCGGCGGC GCGCCGCCGA CCTCCGGCCT GCCCGCCGCG CGCGCCGACG CGCCGCGTTT CAGGATCGTG CCGGCCCGCC ATCGCGCGCG CACGGCGGGC ACCGTGCTCG CCGCCGTGCT GATCGCGCTC GTGCTGAATT CGGTGCTCGG CAATCCGCAA TGGGGCTGGC CGGTCTTCGC CGAATGGTTC CTGTCGGAGC CGGTGCTCTC AGGGCTCGCG CGCACGCTGC TGCTGACCGC GCTCGGCGCG CTGTTCGGCT TCGCGCTCGG CGTGCCGCTC GCGCTCGCGC GCGTGTCCCG CTCGCCGCTG CTCGCCGCGT GCGCATGGGC GTTCATCTGG CTGTTCCGCT CGATCCCGCT CATCGTGCTG CTGCTGATCC TGAACAACCT CGGCTACCTG TACGATCACG TGCGGCTCGG CGTGCCGTTC ACCGGCATCA CGTTCGCCGA GGTCGCGACG ACCGATCTGA TCAGCCCGTT CTGCGCGGCG GTGCTCGGCC TGACGCTCAA TCACGCGGCG TTCGCGGCCG AGGGGATTCG CGGCGGCATC CTGTCGGTCG ATCAGGGGCA GCTCGAGGCG GCTGCCGCGC TCGGCCTGCC GCGCGCGCGA CAGGCGACGC GCATCGTGCT GCCGCAGGCG ATGCGTGCGT TCCTGCCCGT CGCGTTCAAC GATCTGATCG CGCTCGCGAA GGGTTCCTCG ATGGTGTACG TGCTCGCGAT GCCCGAGCTC TTCTACACGG TGCAGGTGAT CTATCGGCGC AATCTCGAAG TGATTCCGTT GCTGATGGTC GCGACGGTCT GGTATCTGAT CATCCTGACC GTGCTGTCGA TCGTCCAGGC GCAGGTCGAG CGGCGTTACG CGCGCGGCGC GGTGCGCGAG CCGGAACGAT CGCCGGCCGC GGCGCTCGTC GGCAGGCTGG CGGGCGCGTT GCCGCGGCGG CGCGTCGGGG CGGCGGGCCG CTCGGACGCG GCGGGCGACG CGCGGCCGGC TTCGAAGGCG GCCGGTGCGC CGAGCGCGGC GGATGCGCCG GGCGCCGCCG CGCCGGGCGC TTCGGCATCG TTCGCCGCAT CGCGCGCGCC CGGCCGGGCG CGCTCGCCGG GTGCCGCGCG CACACCGGCG AGCGGGCGCC GCGGCAGCGA GATCGCCGTG CAGCGCGTGT CGAAGCGCTT CGGCGCGCAC AAGGTGCTCG ACGACGTGTC GTTCGTCGCG CCGGCGGGCA GCGTCACCGT GATCCTCGGT CAGTCCGGCT CCGGCAAATC GACGCTGCTG CGCACGATCA ATCACCTCGA GCGCGTCGAC GGCGGCTTCA TCGATATCGA CGGCGAGCTG ATCGGCTATC GCCGCGAAGG CGACACGCTG TACGAACTGA AAGAGAAGGA CGTGCTGCGC CGCCGAGCGG ACGTGGGCAT GGTGTTCCAG AACTTCAACC TGTTTGCGCA CCTCACCGTG CTCGAGAACA TCGTCGAGGC GCCCGTCGCG TCGGGCCGCG CGACGCGCGC CGAGGCCGAG CGCGACGCGC GCGAGCTGCT CGCGCGCGTC GGCCTTGCCG CGAAGGCGCA CGCGTATCCG CGCCAGCTTT CGGGCGGGCA GCAGCAACGC GTCGCGATCG CGCGCGCGCT CGCGCTGAAG CCGAAGGTGC TGTTGTTCGA CGAGCCGACA TCCGCGCTCG ATCCGGAACT CGTCAACGAG GTACTCGACG TGATCAAGGA GCTCGCGCGC TCGGGGACGA CGCTTGTCAT CGTCACGCAC GAGATCGGTT TTGCGCGTGA GGTCGCGGAT ACGGTTCTCT TCATGGAGCA CGGCCGGATC GTCGAGGCGG GGCCGCCCGC GCAGGTGCTC GGCGCACCCG CGCATCCGCG CACGCGCGCG TTTTTGTCGA AGGTGCTGTG A
|
Protein sequence | MSDITHAVGG APPTSGLPAA RADAPRFRIV PARHRARTAG TVLAAVLIAL VLNSVLGNPQ WGWPVFAEWF LSEPVLSGLA RTLLLTALGA LFGFALGVPL ALARVSRSPL LAACAWAFIW LFRSIPLIVL LLILNNLGYL YDHVRLGVPF TGITFAEVAT TDLISPFCAA VLGLTLNHAA FAAEGIRGGI LSVDQGQLEA AAALGLPRAR QATRIVLPQA MRAFLPVAFN DLIALAKGSS MVYVLAMPEL FYTVQVIYRR NLEVIPLLMV ATVWYLIILT VLSIVQAQVE RRYARGAVRE PERSPAAALV GRLAGALPRR RVGAAGRSDA AGDARPASKA AGAPSAADAP GAAAPGASAS FAASRAPGRA RSPGAARTPA SGRRGSEIAV QRVSKRFGAH KVLDDVSFVA PAGSVTVILG QSGSGKSTLL RTINHLERVD GGFIDIDGEL IGYRREGDTL YELKEKDVLR RRADVGMVFQ NFNLFAHLTV LENIVEAPVA SGRATRAEAE RDARELLARV GLAAKAHAYP RQLSGGQQQR VAIARALALK PKVLLFDEPT SALDPELVNE VLDVIKELAR SGTTLVIVTH EIGFAREVAD TVLFMEHGRI VEAGPPAQVL GAPAHPRTRA FLSKVL
|
| |