| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_1224 |
|---|
| Symbol | pvcB |
|---|
| ID | 4789589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008835 |
|---|
| Strand | - |
|---|
| Start bp | 1282361 |
|---|
| End bp | 1283260 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | pyoverdine chromophore biosynthetic protein PvcB |
|---|
| Protein accession | YP_001025026 |
|---|
| Protein GI | 124382024 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.738229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATC TCTTCCTGCA GCGGGCGGTG TCGCTCGAAC CGTTGACGAG CGACGCCGGC
GCGCCCTGTT CGTTCGGCGT GCTCGTGAAG CCGCGCCGCG CGCGCACGCA CGTCGGTGAG
CTGTCGATCG AGTGGCTGCG CGCGCTCGTG CGCAGCCAGC AGCTCGTCGT GCTGCGCGGC
TTCGACAGCT TCGCCGATGC GCCGGGCATG ACGCGCTATT GCGCGGCGTT TGGTGAAATC
ATGATGTGGC CGTTCGGCGC GGTGCTCGAG CTGCGCGAGC AGGCGAATCC GGTCGATCAC
GTGTTCGCGA GCAGCTACGT GCCGCTGCAC TGGGACGGCA TGTATCTGGA GACCGTGCCG
GAATTCCAGG TGTTCCAGTG CGTGCAGGCG ATCGGCGATG CGCACGGCGG GCGCACGACG
TTCTCGAGCA CCACGGAGGC GCTGCGCGTG GCGACGCCCG AGACGCGCGC GCTCTGGCAT
CGCGCGCACG GCCGCTATCG GCGCACGGTC GAGCTCTACA GCAACACGGT CGAAGCGCCG
ATCGTCGAGC GGCACCCGCG CCGCGAATTT CCGATCCTGC GCTTCTGCGA GCCGCCGATC
GCGGACGATC CGACGTTCAT CAATCCGTCG AGCTACGCAT TCGGCGGCAT CGCCGACAGC
GAGCGGGACG CGCTGTTCGG CAGCCTGACG CGCGCGCTCT ACGATCCGCG CGCGCACTAC
GCGCACCGCT GGCGCACGGG CGACGTCGTG CTCACCGACA ACTTCACGCT GCTGCACGGC
CGAGAGCGCT TCACGAGCCG AAGCGGCCGC CATCTGCGCC GCGTGCACAT CCATGGCGAT
CCGCCGCTGC GCAATCCGCA CCTGTCGAAG CACCCGCACG ACGCGGCCGC TTCGGCCTGA
|
|---|
| Protein sequence | MNDLFLQRAV SLEPLTSDAG APCSFGVLVK PRRARTHVGE LSIEWLRALV RSQQLVVLRG
FDSFADAPGM TRYCAAFGEI MMWPFGAVLE LREQANPVDH VFASSYVPLH WDGMYLETVP
EFQVFQCVQA IGDAHGGRTT FSSTTEALRV ATPETRALWH RAHGRYRRTV ELYSNTVEAP
IVERHPRREF PILRFCEPPI ADDPTFINPS SYAFGGIADS ERDALFGSLT RALYDPRAHY
AHRWRTGDVV LTDNFTLLHG RERFTSRSGR HLRRVHIHGD PPLRNPHLSK HPHDAAASA
|
|---|
| |