| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_1207 |
|---|
| Symbol | |
|---|
| ID | 4788550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008835 |
|---|
| Strand | + |
|---|
| Start bp | 1262072 |
|---|
| End bp | 1264342 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | ATP-dependent Clp protease, ATP-binding subunit |
|---|
| Protein accession | YP_001025009 |
|---|
| Protein GI | 124381650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.931825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG TGCTGCTGCG GCGCAGGCAG AACAATCCGC TGCTCACCGG CGAGGCGGGC
GTGGGCAAGA CGGCCGTCGT CGAGGGCCTC GCGCTCGCGA TCGCGAACGG CGACGTGCCG
CCGAAGCTGG CCGACGTGCG CCTGATGAGC GTCGACGTGG GCGCGCTGCT GGCCGGCGCG
GGCATGAAAG GCGAATTCGA ATCGCGCCTG AAAGGCGTGC TCGAGGCCGC GGCGAAATCC
GTCGCGCCCG TCATCCTGTT CGTCGACGAG ATTCACACGC TGATCGGCGC GGGCGGACAG
GCCGGCACGG GCGACGCGGC GAACCTGCTC AAGCCCGCGC TCGCGCGCGG CACGATCCGC
ACGATCGGCG CGACGACATG GGCGGAGTAC AAGCGGCACA TCGAAAAGGA TCCCGCATTG
ACCCGCCGCT TTCAGGTGCT GCAAGTGCCG GAGCCCGAAG AGCCGGCCGC GGTGCACATG
GTGCGGGGCG TCGCGCGAGC GTTCGCGCGG CACCACCGCG TGACGGTGCG CGACGAGGCG
ATCCGCGCCG CCGTCGCGCT GTCGCACCGC TACATTCCGT CGCGGCATCT GCCGGACAAG
GCGATCAGCC TCCTCGACAC CGCATGCGCG CGCGTCGCGC TCTCGCAGCA CGCCGCGCCC
GGCGAACTGC AGCACGTGCG CCAGCGCTTG CTCGCGGCGC GCGCCGAGCG CGATCTGCTC
GAACAGGAGG CGCGCATCGG GCTCGACGCC GGGCAATCGC TCGCGGCGGT GCGCAAACGC
ATCGAAGCGC TCGCGGCCGA GGAAGCGGCC GTCGACGCGC GCTGGAAGGC GCAGGCCGAC
GCGGCGCGCG CGCTGCTCGC CGCGCGCGAG GCCGCGCTCG CGGAATGTCA CCGCGAGTCT
TGCGCCGAAA CGCGCGCCGG CTCGCTTTCC GAATCTCGTA CCGAATCTCG TACCGAATCG
CGCGCCAGAT CACACATCGA CTCCAGCGCC TGTGCTCACA GCGACGTCCC GGCCGAAATG
CACGCCGGTT CGCGCACCGC AACGCGTCCG GACACGCACG CCGAAGCGCA CGCCGCCCCC
GCCTCGCCCC CGCCCGCCGC CGATACGCCG CACGCAGGCG CCGCCCCCGG GCTGCGCGAG
CTCGAACGCG CGCTCGCGGC GGCCCAGGGC GACGCACCGC TCGTGTTCCC GGAAGTCGAC
GAGGCGATCG TCGCGCAGAT CGTCGCGGAT TGGACCGGCA TTCCGGTCGG CCGCATGATG
ACCGACGAAG TCGCCGCCGT GCGCGCGCTG CCCGCGACGC TCGAGGCGCG CGTGATCGGC
CAGCCCGACG CGCTGCGGCA GATCGGCGAG CGCGTGCAGA CCGCGCGCGC GGGCCTCGCC
GATCCGAAGA AGCCGCTCGG CGTATTCCTG CTTGCGGGCC CGTCGGGCGT CGGCAAGACC
GAAACGGCGC TCGCGCTCGC CGAGGCGCTG TACGGCGGCG AACAGAGCCT GATCACGATC
AACATGAGCG AGTACCAGGA AGCCCACACC GTGTCGGGCC TCAAGGGCGC GCCACCCGGC
TATGTCGGCT ACGGCGAGGG CGGCGTGCTG ACCGAGGCGG TGCGGCGGCG GCCGTACAGC
GTCGTGCTGC TCGACGAGAT CGAGAAGGCG CACCGCGACG TGCACGAACT CTTCTTCCAG
GTCTTCGACA AGGGCTACAT GGAAGACGGC GACGGCCGCT ACATCGATTT CCGCAACACG
ACGATCCTGC TCACGAGCAA CGTCGGCGCG GAACTGAGCA CGAGCCTGTG TGCCGACGCA
TCGCTCGCGC CCGATGCCGC CGCGCTGCGC GACGCGCTCA TGCCCGAACT GCTGAAGGTC
TTCCCCGCCG CGTTCCTCGG GCGCGTGAGC GTCGTGCCGT ACCGGCCGCT CGAAGCGCGC
GCGCTCGCGC GCATCGTGCG CCTGCATCTG GATCGCGTCG TCGCGCGCAT GGCCGAGCGG
CACCGCATCG CGCTCGCGTA CGACGACGCC GTCGTCGACT ACGTCGTCGG GCGTTGCCTC
GTGCAGGAAA CCGGCGCGCG GCTGCTGATC GGATTCATCG AGCAGCACGT GCTGCCTCGG
CTGTCCGCGC TGTGGCTCGA CGCGTTCCCG TCGAAGGCGG CGCTCGCGCG CATCGACATC
GGTGTGGCCG ACGCGGCCGC GCCCGCGGCG CGCGCGCTCG TCTTCCGGCC CGGCCAAGCA
AGCCGGGCGG GGCCGCCGAA CGCGCCGCTC ACCGCCGTGC AGGCCGGCTA G
|
|---|
| Protein sequence | MTDVLLRRRQ NNPLLTGEAG VGKTAVVEGL ALAIANGDVP PKLADVRLMS VDVGALLAGA
GMKGEFESRL KGVLEAAAKS VAPVILFVDE IHTLIGAGGQ AGTGDAANLL KPALARGTIR
TIGATTWAEY KRHIEKDPAL TRRFQVLQVP EPEEPAAVHM VRGVARAFAR HHRVTVRDEA
IRAAVALSHR YIPSRHLPDK AISLLDTACA RVALSQHAAP GELQHVRQRL LAARAERDLL
EQEARIGLDA GQSLAAVRKR IEALAAEEAA VDARWKAQAD AARALLAARE AALAECHRES
CAETRAGSLS ESRTESRTES RARSHIDSSA CAHSDVPAEM HAGSRTATRP DTHAEAHAAP
ASPPPAADTP HAGAAPGLRE LERALAAAQG DAPLVFPEVD EAIVAQIVAD WTGIPVGRMM
TDEVAAVRAL PATLEARVIG QPDALRQIGE RVQTARAGLA DPKKPLGVFL LAGPSGVGKT
ETALALAEAL YGGEQSLITI NMSEYQEAHT VSGLKGAPPG YVGYGEGGVL TEAVRRRPYS
VVLLDEIEKA HRDVHELFFQ VFDKGYMEDG DGRYIDFRNT TILLTSNVGA ELSTSLCADA
SLAPDAAALR DALMPELLKV FPAAFLGRVS VVPYRPLEAR ALARIVRLHL DRVVARMAER
HRIALAYDDA VVDYVVGRCL VQETGARLLI GFIEQHVLPR LSALWLDAFP SKAALARIDI
GVADAAAPAA RALVFRPGQA SRAGPPNAPL TAVQAG
|
|---|
| |