| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_0881 |
|---|
| Symbol | |
|---|
| ID | 4788953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008835 |
|---|
| Strand | - |
|---|
| Start bp | 921659 |
|---|
| End bp | 922756 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | putative outer membrane porin |
|---|
| Protein accession | YP_001024695 |
|---|
| Protein GI | 124382599 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAA AGAGTCTGGC GATGGCGGTG GCGGGTATCG GGATCGGCGC GGCGGTGCCG
CCGGCGCTCG CGCAATCGAG CGTGACGCTG TACGGCATCG TCGATTCCGG CATCACGTAC
ACGAACAACC AGAAGGGGCA TTCTGCCTGG AAGGCGACGA GCGGCAATGA GCAGGCCGCC
CGCTGGGGGC TTGTCGGGCG CGAGGATCTC GGCGGCGGCA CGAGCGCGAT ATTCCGGCTC
GAGAACGGCT TCGACATCGA GAACGGTACG GCGAGCCAGG GCGGTCGGCT GTTCGGACGT
CGCACGTACA TCGGATTGGC GAACGATCGC TGGGGCGCGT TCACGATGGG CCGTCAGTAC
AACGCGGTGC AGGAAACGCT GGCTCCGCTG CATATCGCAA CCGTACTCGG AAGATACGCA
CATCATCCGT TTGATGCCGA CGACCTGGAC AGTACGTTTC GCACGAACAA TTCGGTCCAG
TACCAGACGC CCGATTGGGG CGGCGTGCGC GCGATCGCGA CGTACGGCTT CTCGAACTCG
ACGTCGTTCG CGCGGAACCG CACATGGAGC GTCGGGGCGA GCTATGCGCG CGGCCCGCTG
CAACTCGCCG CCGCATACGT GCGCGTCGAC TATCCGGCGA TCGATGCGAC CGGCGCGATC
GCGTCCGACA ATTACTACGG GTTCGTCAAG GGCGTCGCGC GGCAGCAGAT CTGGGGCGCG
GGCGGCGCGT ACGCGTGGGG CGGCGCGACC TTCGGGCTGT TGTATACGAG CGCGCTGTTC
AGTCTGCAGA CGGGCGGCGC CGAGCGCTTC AACAATTTCG AGGGCAGCGT GCGCTACCGC
GTGACGCCCG CGGTGCAGGT CGCGCTCGGC GAGACGTACA CGCAGGTGCT CGCGTCGCAC
GCGGCCGCGC ATGACGCGCA CTATCTGCAG ACGAGCGCGG GGATCCAGTA TTTCCTGTCG
AAGCGCACGG ACGTCTATTT GAACGTGTCC TATCAACGGG CATCGTCGAA TGCCGTGGCG
TGGATCAAGG GGCTTGACGG GGCATCGAGC ACGCGCACGC AGATCGTCGC GGTGACGGGC
ATCCGGCACA AGTTCTGA
|
|---|
| Protein sequence | MKRKSLAMAV AGIGIGAAVP PALAQSSVTL YGIVDSGITY TNNQKGHSAW KATSGNEQAA
RWGLVGREDL GGGTSAIFRL ENGFDIENGT ASQGGRLFGR RTYIGLANDR WGAFTMGRQY
NAVQETLAPL HIATVLGRYA HHPFDADDLD STFRTNNSVQ YQTPDWGGVR AIATYGFSNS
TSFARNRTWS VGASYARGPL QLAAAYVRVD YPAIDATGAI ASDNYYGFVK GVARQQIWGA
GGAYAWGGAT FGLLYTSALF SLQTGGAERF NNFEGSVRYR VTPAVQVALG ETYTQVLASH
AAAHDAHYLQ TSAGIQYFLS KRTDVYLNVS YQRASSNAVA WIKGLDGASS TRTQIVAVTG
IRHKF
|
|---|
| |