| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_0786 |
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| Symbol | pbpC |
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| ID | 4790297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei NCTC 10229 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008835 |
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| Strand | + |
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| Start bp | 827011 |
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| End bp | 830193 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_001024601 |
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| Protein GI | 124382295 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.879691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGTCGA CGCTCGCGCG GCGGGCCGCG CAGGCGGCCG TGCCGCGATG GGTTTGGCCG
TTCGCCCGAC CGGCCGGGTG GTCGCTCGGT TCGGTGTTCG GTTCGGTGTT CGGTTCGGTG
TTCGGTTCGG TGTTCGGTTC GGTGTTCGGT CCAGCGTTCG GTCCGGCGTT CGGTCCGGCG
TTCGGTTCGG CGTTCGGTCC GGCGTTCGGT TCGGCGTTCG GTCCGGCGTT CGGTCCGGCG
TTCGGTCCGG CGTTCGGTTC GGCGTTCGGT TCGGCGTTCG GTTCGGTGTT CGGTTCGGCG
TTCGGTTCGG CGTTCGCGGC GTTCGGTCTC GCGCTCGCCC CCCTGCTCGC CGCGCCGCCC
GTTCGGCCGC GCGCCCGGCG GAACCCGCGC CCGTGCGGCT CGCCGCGGCG CGCGGCGCTC
CCGCGCGCGC GAACGACGGC GAGCCGCACG CTCGCCGTCG CGATGCTCGC CGCGCCGCTC
GCCGCGCACG CGCTGCCGGC CTACGACGAC GTGCGGCGCG ACTGGCGCAG CACCGACTGG
TTGCTGCTCG CACGCGACGG CACGCCGCTT CAGCGCACGC GCGTGGAGCT CACCGAGCGG
CGCGGCGACT GGATCGCGCT CGCCGACGTA TCGCCCGCGT TTCGAGAGGC GATCGTCGTA
TCGGAGGACA AGCGCTTCTA CGCGCACAGC GGCGTCGACT GGCGCGGCAT CGCGGGCGCC
GCATGGGGCA ATCTGTGGAA CGAGCGCACG CGCGGCGCGT CGACGGTGAC GATGCAGCTC
GCCGGCCTGC TGAGCGACAC GCCGCGCCGC TCGGGCCAGC GCTCGCTGCC GCAGAAGGCC
GCGCAGGCGA TGAACGCGCT GCGGCTCGAA CGCGGCTGGC GCAAGGATCA GATCCTCGAG
GCGTATCTGA ATCTCGTGCC GTTTCGCGGC GAGACGGTCG GGCTCGACGC GATGTCGCAC
GCGCTGTTCG GCAAGGCGCC GTCGGGGCTC GACGTGCGCG AATCGGCGGT GGCCGCCGCG
CTCGTGCGCG CGCCGAACGC GTCCGCCGCG AAAGTGGCCG AACGCGCGTG CCGGATCCTG
CGCGACCTGC GCGCCGCGCA ACCGTGCGAA TCGCTCGACG GCTACGTGCG CTTCGTGACG
TCCGCCCCGC CGGGCGCCGC GCGCGACGGC GGCGAAGCGC TCGCGCCGCA CTTCGCGCGG
CGCGTCGCGG CCGAGGTGAA GCCCGGCGCG GGCGCGCGCG TGCGCTCCAC GCTCGACGCG
CCGCTGCAGC GCTTCGCGCG CGACACGCTC ACGCGCGCGC TCGCCGAGCT CAACGCGCCC
GCCCATCGGC GCCACGTGCA GGACGGCGCG GTCGTCGTGA TCGACAACGC GACGGGCGAG
ATCCGCGCAT GGGTCGGCTC GTCGGGCGCG CTGTCGGCCG CGCGCGACGT CGACGCGGTG
CTCGCGCCGC GCCAGGCCGG CTCGACGCTC AAGCCGTTCC TCTACGCGCA GGCGCTCGAC
GAACGGCGCC TCACCGCCGC TTCGCTGCTC GACGACGCGC CGATCGATCT CGCCGCGGGC
GGCGGCCTGT ACATCCCGCA GAACTACGAC AAGCACTTCA AGGGCTGGGT CAGCGTGCGC
ACCGCGCTCG GCGGATCGCT GAACGTGCCG GCCGTGCGCA CGCTCGTGCT CGTCACGCCG
CACCGCTTCG CGCGCACGCT CACCGCGCTC GGGCTGCCGC TCGCCGAAGA AGGCGATTAC
TACGGTTTCA GCCTCGCGCT CGGCAGCGCC GACGTCACGC TGCTGTCGCT CGCGAACGCG
TACCGCGCGC TCGCCAACGG CGGCGTCGCG CGGGCGACGC TCGACGTGCC GGGCGGAAGC
GGAAGCCGGA ACGGAAACGG AAACGGAAAT GACGCCGTCA CGTCGGCCCC GTTCGCGCCG
ACCGTTTCGA AATCAAAGGT TGGCGCGTCA GCGGTTTTCC CGCGGGCCGT CTCGACGAAG
GCCGAGCCCG CGAAGCCAGT GCCCACGGCG GCCCTTTCCC CCACGAGCGC TTCGACATCG
ACCGCCGGCA AGCCGGCGGC GCACGCCGCA GCGGGCACGC GCGTATTCAG CGAAGCCGCG
GCGTACATCG TCACCGACAT CCTCGCCGAC AACAACGCGC GCGTGCGCAC GTTCGGCTTC
GACAGCCCGC TCGCGACGCG CTTCTTCTCC GCCGTCAAGA CGGGCACGAG CAAGGACATG
CGCGACAACT GGGCGCTCGG CTACACGTCG CGCTACACGG TGGGCGTGTG GGTGGGCAAC
GCGGACGGCT CGCCGATGTG GGACGTATCG GGCGTCACGG GCGCGGCGCC CGTGTGGGCC
GCGATCGTCG GCTATCTGCA CCGCGATCTC GCGAGCCGCG CGCCGCGCCC GCCCGCCCGC
CGGCGTCGAG CAGCGCCGCG TCGCGTTCGA ACGCGACGTC GAGCCCGCGC GCCCCGAGTG
GTTCATCGCC GGCACCGCGC TCGACACGGT GCGCCTCGCC GCGCCCGCGA CCGCCGCCGC
GGGCGGCGCA GACCGGCCGC GCGCGCCGCT TTCGATCGGC GCGCCGACCG ACGGCACGAT
CTTCGCGATC GATCCGGACA TCCCGCCGAA GCACCAGCGA ATCTGGTTCG AGCGCGCGGC
GGGGCGCGCG GCGCGCTTCT CGTGGCGGCT CGACGGCAAG GTGATCGGCC GCGGCGAGCG
CCTCGCGTGG ATGCCGTGGC CGGGATCGCA CCGGCTCGAG CTCGTCGACG CGCGCGGCAA
CGTCGCCGAC GCGGTCGGCT TCGAGGTGCG CGGCGCGTTC GCGAAGACGG CGGCCCCACC
GAAGCCGTGA GACGGCCCGC GCGCGCCGCC CAAGCGGCGC GCGCTCACAG CGCATCGAGA
AACTGTTCGA GCGCCGCCTT CATCTTGTGG ATCGCCGCAT CCGGCAACAG CATCACCAGC
TTCGCGACGA AGCCGCCGTG CTCGAGCGTG AAATGCACTT CGAGCAGCAG CGCGACGTCC
CATCGGCCGA GGCGCTCGTC GCCGAGCGCC GACGCGAGCG AGCCCGGCGG CACGAATGTC
GGGCGCAGGA ACGTGAGCCG CCGGTCGAGC TGCTCGAACA CGCTGTGCAC GCACGCGCCG
ACGAGCAGGC TCGCGATGTC GGACAGCGCC TCGTCCTCGA TGTCGTCCGT CGCGTCGTCG
TAG
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| Protein sequence | MASTLARRAA QAAVPRWVWP FARPAGWSLG SVFGSVFGSV FGSVFGSVFG PAFGPAFGPA
FGSAFGPAFG SAFGPAFGPA FGPAFGSAFG SAFGSVFGSA FGSAFAAFGL ALAPLLAAPP
VRPRARRNPR PCGSPRRAAL PRARTTASRT LAVAMLAAPL AAHALPAYDD VRRDWRSTDW
LLLARDGTPL QRTRVELTER RGDWIALADV SPAFREAIVV SEDKRFYAHS GVDWRGIAGA
AWGNLWNERT RGASTVTMQL AGLLSDTPRR SGQRSLPQKA AQAMNALRLE RGWRKDQILE
AYLNLVPFRG ETVGLDAMSH ALFGKAPSGL DVRESAVAAA LVRAPNASAA KVAERACRIL
RDLRAAQPCE SLDGYVRFVT SAPPGAARDG GEALAPHFAR RVAAEVKPGA GARVRSTLDA
PLQRFARDTL TRALAELNAP AHRRHVQDGA VVVIDNATGE IRAWVGSSGA LSAARDVDAV
LAPRQAGSTL KPFLYAQALD ERRLTAASLL DDAPIDLAAG GGLYIPQNYD KHFKGWVSVR
TALGGSLNVP AVRTLVLVTP HRFARTLTAL GLPLAEEGDY YGFSLALGSA DVTLLSLANA
YRALANGGVA RATLDVPGGS GSRNGNGNGN DAVTSAPFAP TVSKSKVGAS AVFPRAVSTK
AEPAKPVPTA ALSPTSASTS TAGKPAAHAA AGTRVFSEAA AYIVTDILAD NNARVRTFGF
DSPLATRFFS AVKTGTSKDM RDNWALGYTS RYTVGVWVGN ADGSPMWDVS GVTGAAPVWA
AIVGYLHRDL ASRAPRPPAR RRRAAPRRVR TRRRARAPRV VHRRHRARHG APRRARDRRR
GRRRPAARAA FDRRADRRHD LRDRSGHPAE APANLVRARG GARGALLVAA RRQGDRPRRA
PRVDAVAGIA PARARRRARQ RRRRGRLRGA RRVREDGGPT EAVRRPARAA QAARAHSASR
NCSSAAFILW IAASGNSITS FATKPPCSSV KCTSSSSATS HRPRRSSPSA DASEPGGTNV
GRRNVSRRSS CSNTLCTHAP TSRLAMSDSA SSSMSSVASS
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