Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_0382 |
Symbol | |
ID | 4788784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008835 |
Strand | - |
Start bp | 383181 |
End bp | 386282 |
Gene Length | 3102 bp |
Protein Length | 1033 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | hydrophobe/amphiphile efflux family protein |
Protein accession | YP_001024206 |
Protein GI | 124381884 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCG GCGCGCCCCA CGATTCCGGC GCGGCCCGCG CGCGCTTCAC GGACGTGTTC GTCCGCCGCC CGGTGCTGTC GCTCGTGTTC AGCCTGCTGA TCCTGCTCGT CGGCCTGCGC GCGCTGATGT CGCTGCCGGT GCGCCAGTAT CCGGCGCTGG AGAGCGCGAC GATCAGCGTC GCGACCGATT ATCCCGGCGC GTCGCAAGAG CTGATGCAGG GCTTCGTGAC GACGCCGATC GCGCAATCGA TCGCGACCGC CGACGGCATC GAGTACATCA CGTCGACGAC GACGCAGGGC AAGAGCGTCG TGAAGGCGCG GCTGCGCCTG AACGCGAACG CGGACCGCGC GATGACCGAG GTGATGGCCA AGGTCCAGCA GGTGAAGTAC AAGCTGCCCG CCGACGCGTA CGATTCGGTG ATCACGAAGC TCACCGACGC GCCGACCGCG GTGATGTATC TCGGCTTCGC GAGCGATGCG CTGTCCATTG CGCAGATCAC CGATTATGTG GTGCGCGTCG CGCAGCCGCT CGTGACGACG GTGCCGGGCG TCGCCTCCGC CGAGATTCTC GGCGGCCAGA ACCTCGCGAT GCGCGTCTGG CTCGACGCGA CGCGGCTCGC CGCGCACGGG CTGTCCGCGG GCGACGTCGC CGCGGCGATC CGCGCGAACA ACGTGCAGGC GGCGCCGGGT CAGGTCAAGG GCTCGCTCAC GATCGCCGAC ATCTCGGCGA ACACCGATCT GACCGACGTC GGCGCATTCA ACGAGATGGT CGTGAAAAGC GCGCCGAACG GTGGCGGCCT CGTGCGGCTG AAGGATGTCG CGACCGTGGA GATCGGCGGC GAGAACTACA ACTCGAGCGC GCTGATGAAC GGCCGCCGCG CGGTGTACAT CGCGGTCAAC GCGACGCCCG CGGGCAACCC GCTCGAGATC GTGCGCGGCG TCGGCGCGGT GCTGCCCGCG ATAGAGCGCA ACAAGCCCGC GAGCGTGCAG ATCGCGAACA TGTTCGACGG CGCGCGCTTC GTCAACGCGT CGATCGCCGA AGTCCGCTCG ACGCTCACCG AGGCGATCGC GATCGTCGTC GTCGTGATTT TCCTGTTCCT CGGCTCGTTT CGCGCGGTGA TCATCCCGGT GCTGACGATT CCGCTGTCGC TCGTCGGCTC GGCGGCGCTG ATGCTGGCCG CGGGCTTCTC GCTGAACCTG CTGACGCTGC TCGCGATGGT GCTCGCGATC GGGCTCGTCG TCGACGACGC GATCGTCGTC GTCGAGAACA TCCACCGCCA CATCGAGCAG GGCGAGCCGC CCGTGCGTGC GGCGCTGATC GGCGCGCGCG AGATCGCGTC GCCCGTGCTC GTGATGATGG CGACGCTGAT CTCCGTCTAC GCGCCGATCG GGCTGATGGG CGGCCTCACC GGCTTGCTGT TCAAGGAGTT CGCGTTCACG CTCGCGGGCG CGGTGCTCGT GTCGGGCATC GTCGCGCTCA CGCTCTCGCC GATGCTCGGC TCGCTGCTGC TCACGAGCAG GATGTCCGAG GGCCGCGTCG CGAAGGCGAT CGAGCGCACG CTCGAGCGCG TGACGCACGC GTACCGGCGC GGCCTGCACG CAAGCCTCGC CGCGCGGCCC GCGATTCTGC TGATCGGCGC CGGCGTGCTC GCGGGCATCG TGCTGCTCTT CTCGGGTGTG AAGCGCGAGC TCGCGCCGCA GGAGGACCAG GGCTCGATCA TGGTCGCGGT GAAGGCGCCG CAGTATGCGA ACCTCGATTA CATGGAGCGC TACGCGCCCG ACATCGAGCG CGTGTTCCGC ACGCTGCCCG AGGCCGACAC GAGCTTCATC CTGAACAGCT ACGGCGGCAG CAATCTCGGC TTCGCGGGCG TGAACCTCGT CGATTGGGAC AAGCGCACGC GCAGCGCGGC GGCGCTGCAG GCGCTGATCC AGGCGCGCGG CGACGGGATC CGCGGCGAGC GCGTGTTCGC GTTCCAGTTG CCGGCGCTGC CCGCGTCGAG CGGCGGGCTG CCGATCCAGA TGGTGCTGCG CACGCCGTCG GGTTTCGCCG ATCTCTACGC GCAGATGGAG CGGATCAAGG CGGCCGCGCA AAAGAGCGGC CTCTTCGCGG TGCTCGACAG CGATCTGACG TTCGACAGCC GCGCGGTGGG CGTGACGATC GACCGCAATC AGGCGAACAC GCTCGGCGTG ACGATGAAGG ACATCGCCGA CACGCTCGCC GTGCTCGTCG GCGAGAACTA CGTGAACCGC TTCAACTTCA AGGGCCGCTC ATACGACGTG ATCCCGCAGG TGTCGCGCAG CGAGCGGCTG TCCTCCGAGA TGCTCAGCCG CTATTACGTG AAGACGGGCT CGGGGCGGAT GATTCCGCTG TCGACCGTGA TTCAAGTGAC CAACGGCAGC CAGGCGAACG CGCTCAGCCA GTTCAACCAG ATGAACGCGG CGACGTTCTC CGCGGTGCCC GCGCCCGGCG TGACGATGGG CGACGCGGTG GCGTTCCTCG AGGCGCAGAA GCTGCCCGCC GGCTTCTCGA TCGACTGGCT CGGCGAATCG CGGCAATACG TGCAGGAAGG CAACCGGCTC GCCGTCACGT TCGGCTTCGC GCTGATCGTG ATCTTCCTCG TGCTCGCCGC GCAGTTCGAG AGCCTGCGCG ATCCGCTCGT GATCCTGGTG TCGGTGCCGC TGTCGATCTG CGGCGCGCTC GCCCCGCTCT ACCTCGGTTT CGCGACGCTC AACATCTATA CGCAAATCGG GCTCGTCACG CTGATCGGGC TGATCTCGAA GCACGGGATC CTGATGGTCA GCTTCGCGAA CGATCTGCAG CGCCACGAAG GGCTCGACCG GCGCGCGGCG ATCGAGCGCG CGGCGGCCGT GCGGCTGCGT CCGATCCTGA TGACGACCGC GGCGATGGTC GCGGGCCTCG TGCCGCTCGT GTTCGCCGCA GGCGCCGGCG CGGCGAGCCG CTTCGCGATC GGCATCACGG TGTCGACCGG CATGCTGGTC GGCACGCTGT TCGTGCTGCC GACCGTCTAT ACGTTCGTCG CGAAGGATCA CGGCGCGGCG ATGCGCAGCG AGCGCGCGCA ACTGCTCGCC GCCACTCGGT AA
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Protein sequence | MNAGAPHDSG AARARFTDVF VRRPVLSLVF SLLILLVGLR ALMSLPVRQY PALESATISV ATDYPGASQE LMQGFVTTPI AQSIATADGI EYITSTTTQG KSVVKARLRL NANADRAMTE VMAKVQQVKY KLPADAYDSV ITKLTDAPTA VMYLGFASDA LSIAQITDYV VRVAQPLVTT VPGVASAEIL GGQNLAMRVW LDATRLAAHG LSAGDVAAAI RANNVQAAPG QVKGSLTIAD ISANTDLTDV GAFNEMVVKS APNGGGLVRL KDVATVEIGG ENYNSSALMN GRRAVYIAVN ATPAGNPLEI VRGVGAVLPA IERNKPASVQ IANMFDGARF VNASIAEVRS TLTEAIAIVV VVIFLFLGSF RAVIIPVLTI PLSLVGSAAL MLAAGFSLNL LTLLAMVLAI GLVVDDAIVV VENIHRHIEQ GEPPVRAALI GAREIASPVL VMMATLISVY APIGLMGGLT GLLFKEFAFT LAGAVLVSGI VALTLSPMLG SLLLTSRMSE GRVAKAIERT LERVTHAYRR GLHASLAARP AILLIGAGVL AGIVLLFSGV KRELAPQEDQ GSIMVAVKAP QYANLDYMER YAPDIERVFR TLPEADTSFI LNSYGGSNLG FAGVNLVDWD KRTRSAAALQ ALIQARGDGI RGERVFAFQL PALPASSGGL PIQMVLRTPS GFADLYAQME RIKAAAQKSG LFAVLDSDLT FDSRAVGVTI DRNQANTLGV TMKDIADTLA VLVGENYVNR FNFKGRSYDV IPQVSRSERL SSEMLSRYYV KTGSGRMIPL STVIQVTNGS QANALSQFNQ MNAATFSAVP APGVTMGDAV AFLEAQKLPA GFSIDWLGES RQYVQEGNRL AVTFGFALIV IFLVLAAQFE SLRDPLVILV SVPLSICGAL APLYLGFATL NIYTQIGLVT LIGLISKHGI LMVSFANDLQ RHEGLDRRAA IERAAAVRLR PILMTTAAMV AGLVPLVFAA GAGAASRFAI GITVSTGMLV GTLFVLPTVY TFVAKDHGAA MRSERAQLLA ATR
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