Gene BMA10229_0245 details

Gene Information

• Locus tag: BMA10229_0245
• Symbol: pcaH
• ID: 4789834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei NCTC 10229
• Kingdom: Bacteria
• Replicon accession: NC_008835
• Strand: -
• Start bp: 235138
• End bp: 235872
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 67%
• Product: protocatechuate 3,4-dioxygenase, beta subunit
• Protein accession: YP_001024070
• Protein GI: 124381424

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.000128841
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACAATCA TCAATCTGGA GACGTTTCCG ATGGATTCCT CGACCCTCGC GCCGCGCGAC 
TGGCCGTCGC ATCCCGCGTA CATTCATCCG CCGTACCGCT CTTCCGTGAA GCGCGGCCCG 
ACGCAGCCGC TGATTCCGCT GAAGGAGACG CTGCGTAACC AGCACGCGCC CGTCTACGGC 
GCGGACGATC TCGGCGCGCT CGACCACGAT CTGACGAAGA ACGCGGCGAA GAACGGCGAG 
CCGCTCGGCG AGCGGATCGT CGTCACGGGC CGTGTGCTCG ACGAGGGCGG CAAGCCGGTG 
CGCGACACGC TCGTCGAGGT CTGGCAGGCG AACGCCGCGG GCCGCTACGT GCACAAGGTC 
GACCAGCACG ACGCGCCGCT CGACCCGAAC TTCCTCGGCG CGGGCCGGTG CCTGACCGAC 
GCGAACGGCC GCTATCGGTT CCTCACGATC AAGCCGGGCG CGTATCCGTG GGGCAACCAT 
CCGAACGCCT GGCGGCCGAA CCATATCCAT TTCTCGTTGT TCGGCGACTA CTTCGGCTCG 
CGGCTCGTCA CGCAGATGTA TTTCCCGGGC GATCCGCTCC TCGCGCTCGA CCCGATCTTC 
CAGGGCACGC CCGAGGACGC GCGCGAGCGG CTGATCTCGC GCTTCTCGAT CGACACGACC 
GAAGAAGGCT TCGCGCTCGG CTACGAATTC GACATCGTGC TGCGCGGCCG CGACGCCACC 
CCGATGGAGC GCTGA 

 

Protein sequence

MTIINLETFP MDSSTLAPRD WPSHPAYIHP PYRSSVKRGP TQPLIPLKET LRNQHAPVYG 
ADDLGALDHD LTKNAAKNGE PLGERIVVTG RVLDEGGKPV RDTLVEVWQA NAAGRYVHKV 
DQHDAPLDPN FLGAGRCLTD ANGRYRFLTI KPGAYPWGNH PNAWRPNHIH FSLFGDYFGS 
RLVTQMYFPG DPLLALDPIF QGTPEDARER LISRFSIDTT EEGFALGYEF DIVLRGRDAT 
PMER