Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_0224 |
Symbol | |
ID | 4790529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008835 |
Strand | + |
Start bp | 209407 |
End bp | 210900 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | putative glycolate oxidase, subunit GlcD |
Protein accession | YP_001024049 |
Protein GI | 124381900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00834249 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGAAG TGACCGACGA CGGACAGCAG TGGGACGGGC GGGCGGCGGC TTTCGCGGGC GTGCCGCCCG GCGGCGGCGC GCCTGCCGCG TTCGCCACGC CGCAGACGAT CGGGCGCTGC GTCGAGGCGT TGCGCGCGAT CGTCGGCGAG CGCCTCGCAG TCGGGCGCGC GGTGCGCGAG CAGCACGGCA AGGACATCTC GTTCCATCCG GGCGCGCCGC CCGACGCCGT CGCGTTCGTG CGGACGACGG CCGAGGTCGC CGAGATCACA CGCGCATGCC ATCGGCTGCG CGTGCCGCTG ATTCCGTTCG GCACCGGCAC GTCGTGCGAG GGGCACATCG CCGCGCTGCG CGGCGGCGTA TGCATCGATC TGTCCGGCAT GAACCGGATT CTGCGCGTGA GCGCCGAGGA TCTCGACTGC ACGGTCGAGG CGGGGGTGAC GCGCAAGCAG CTCAATGCGC ACCTGCGCGA CACGGGGCTC TTCTTTCCGA TCGACCCGGG CGCGGACGCG TCGATCGGCG GCATGTGCTC GACGCGCGCG TCCGGCACGA ACGCGGTGCG CTACGGGACG ATGCGCGAGA GCGTGCTCGC GCTCGAAGTC GTGCTGCCGA ACGGCGACGT CGTCTCGGTC GGCTCGCGTG CGCGCAAGTC GGCGGCGGGC TACGATCTCG CGCGCCTGTT CGTCGGCGCG GAAGGCACGC TCGGCACGAT CACGGGCGTC ACGCTGCGGC TGCATCCGCG CCCGGACCGG CTATCCGCCG CGGTGTGCGG TTTCCCGGAC CTGAAGGCCG CGGTCGACTC GGTGATCGGC GTCATCCGCA GCGGCGTGCC GATCGCGCGC GTCGAGTTGC TCGACGCACT GCAGATCGTC GCGTGCAACC GCTATGCGAA GCTGAGCCTC GACGAGCGGC CGACGCTCTT TTTCGAGTTC GCGGGGTTCG GCGCGGCCGT CGACGAGCAG ATCGACTGGG TCGGGGAGAT TTGCGCGGGC TACGGCGGCG GTGAATTCCG CTGGGCGTCG CGCCCGGAGG AGCGCAGCGC GCTGTGGGCG GCGCGGCACG ACGCGTGGTG GGCGGCGCTC GCGCTGCGGC CCGGCTGCGA GGGGATGCCG ACCGATTCGT GCGTGCCCGT GTCGCGGCTC GCGGAGGCGG TGCTCGCCGC GCGCGCGGAC GTGGACGCGC TCGGCCTCGT CGCGACGATC TGCGGGCACG TCGGCGACGG CAACTTTCAC GTATGCATCG CGATCGATCC GGCCGACCCG GACGAACTCG CGCGCGCAAC CGAGCTGAAC CGGCGGCTCG CGCTGCGCGC GATCGCGTTG GGCGGCACCT GCACGGGCGA GCACGGCGTC GGTTACGGGA AGATCGGCTA CCTGGAGCGC GAGCATCCGA CGGCGCTGCA ATTGATGGCG GCCGTCAAGC GCGCGCTCGA TCCGCGCGGC ATCATGAATC CGGGCAAGGT GCTGCATCAC GACCGGTATC CGCCGTTCGA CTGA
|
Protein sequence | MREVTDDGQQ WDGRAAAFAG VPPGGGAPAA FATPQTIGRC VEALRAIVGE RLAVGRAVRE QHGKDISFHP GAPPDAVAFV RTTAEVAEIT RACHRLRVPL IPFGTGTSCE GHIAALRGGV CIDLSGMNRI LRVSAEDLDC TVEAGVTRKQ LNAHLRDTGL FFPIDPGADA SIGGMCSTRA SGTNAVRYGT MRESVLALEV VLPNGDVVSV GSRARKSAAG YDLARLFVGA EGTLGTITGV TLRLHPRPDR LSAAVCGFPD LKAAVDSVIG VIRSGVPIAR VELLDALQIV ACNRYAKLSL DERPTLFFEF AGFGAAVDEQ IDWVGEICAG YGGGEFRWAS RPEERSALWA ARHDAWWAAL ALRPGCEGMP TDSCVPVSRL AEAVLAARAD VDALGLVATI CGHVGDGNFH VCIAIDPADP DELARATELN RRLALRAIAL GGTCTGEHGV GYGKIGYLER EHPTALQLMA AVKRALDPRG IMNPGKVLHH DRYPPFD
|
| |