| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0619 |
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| Symbol | |
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| ID | 4787462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | + |
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| Start bp | 575723 |
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| End bp | 578824 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640093040 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001023618 |
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| Protein GI | 124263148 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.130808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCACA TGGGCATCCC CGCCTACGCC GAGCTGCGGT GCCTCTCGGC CTTCAGCTTC
CTCCGCGGCG CCAGCATGCC GGAGGAGCTC GTCGAGCGCG CCAAGGAGCT CGGCTACAGC
GCGCTGGCCA TCACGGACGA GTGCTCGGTC GCCGGCGTCG TGCGCGCCCA CGTGACTGCC
AAGGAGCAAG GTCTCCCTCT CATCATCGGC TCGCAGTTCC AGCTCGAGGA CGCGCCCTTC
ACCCTGGTGG TTCTGGCCCA GACGCTGCAG GGCTACGGAA ACCTGTGCGA GTTCATCACG
AAGCTTCGGA TGGCCTCGCC GAAGGGCACC TACCGGCTGC AGCTGACCGA TGTCCTGCCG
GGCCCGCTCG CCGAGTGCCT GGTGCTCGTT GCCCCGGACC GGACGGCCTT CCCCGAGGAG
CTGCTCAAGG TTGCCCGCTG GATGCTCACG CATTTCAGCG GCCGCTGCTG GCTCGCCGTC
GAGCTGCTGC GGCTGCTGGA TGACGAGATG TGGCTGCACA AGCTGCGCGA GGTCAGCGAG
CTCACGGCCA TCCCGCTCGT CGCCACGGGA GACGTGCACG TGCATGTGCG CTCCCGCAAG
GCGCTTCAGG ACGTGATGAC CGCCACGCGC GTCGGCAAGC CGCTCACCGG GTGCGGCGGC
GCCCTGCAGC CCAACGCCGA GCGCCATCTG CGCACCCGAC TCAGGCTGGC ACAGACCTAT
CCCGAAGAGC TGCTCACCGA GACTTCCCGC GTCGCCAGCC TGTGCAGCTT CTCGCTGGAC
GAGCTCAAGT ACCAGTACCC CGCCGAGGTG GTGCCTGTCG GCGAGACCGC GTCCTCCTTC
CTGCGCCGGC TCACCTACGA GGGTGCAGGC CGCCGTTGGC CGGAAGGCAT GCAGGCGAAG
GTGCAGACCC AGATCGAGCA CGAGCTCAAG CTCATCAGCG AGCTGGGCTA CGAGCACTAC
TTCCTGACCG TCGCGGACAT CGTCAACTTC GCCCGCTCGC GCCACATCCT CTGCCAGGGC
CGCGGGAGCG CCGCCAACAG CGTGGTCTGC TACTGCCTGG GAGTGACCGA GGTCGACCCG
GCACGCATGA GCGTGCTCTT CGAGCGCTTC ATCTCCAAGG AACGCAACGA GCCGCCGGAC
ATCGACGTCG ACTTCGAGCA CGAGCGTCGC GAGGAGGTCA TCCATTACCT CTACGGCAAG
TACGGCCGGC ACAGGGCGGG GCTCACCGCC ACCGTCATCA GCTACCGCCC GAAGTCCGCC
ATCCGCGACG TCGGCAAGGC GCTCGGCTTC GACCTGGAGA CCGTCGACCG GGTCGCCAAG
AACCACATGT GGTTCGAGGG CCGCCAGGTG CTGACCGAAC GCATGGCCGA GGTGGGACTC
AACCCGGAGG ACCTGGCCGT CAAGCAGCTG CTCGCCCTCA CCGGCCAGCT CATCGGCATG
CCGCGGCACC TCTCGCAGCA CGTAGGCGGG TTCGTTCTGA CCAAGGGTCC GCTCAGTCGC
ATGGTTCCCA TCGAGAACGC GGCGATGGAA GACCGCACGG TCATCGAGTG GGACAAGGAC
GACCTGGACG CGCTGGGCCT CCTGAAGGTG GACGTACTGG CGCTCGGGAT GCTCACCGCC
ATCCGCAAGA GCCTGGAGTT CATCGGCCAG CGCAAGGGCT ACCGCTTCGA GATGCAGGAC
ATCCCGGCCG AGGACCCCGA GACCTACCGG ATGATTTCCA AGGCGGACAC GGTGGGCGTG
TTCCAGATCG AGAGCCGCGC CCAGATGAGC ATGCTGCCGC GCATGAAGCC CGAGTGCTTC
TACGACCTGG TCATCGAGGT CGCCATCGTG CGCCCGGGCC CGATCCAGGG CGGCATGGTC
CACCCGTACC TCAACCGCCG CCAGGGCAAG GAGCCGGTGG TCTACCCCAG CGAAGCACTC
AAGGAGGCGC TGGGCCGCAC GCTCGGCGTG CCGGTCTTCC AAGAGCAGGT GATGCAGGTG
GCCATCCTCG CCGCTGGCTT CACGCCAGGC GAGGCGGACC AGCTGCGCCG CTCGATGGCC
GCGTGGAAGC GCAAGGGCGG CCTGGACCAG TATTACTCGC GCATCGTCGA CGGCATGACC
GCGCGCGGCT ACGAGAAGGC GTTTGCGGAG CAAATCTTCC AGCAGATTCA CGGCTTCTCG
GAGTACGGCT TCCCCGAGTC GCACGCCGCC TCGTTCGCCC TGCTGGTCTA CGCCTCCTGC
TGGATCAAGT GCCACCACCC GGCCGAGTTC CTGGCTGCCA TGCTCAACAG CCAGCCGTTG
GGCTTCTACA CCCCCTCGCA GCTCGTGCAG GACGCCAAGC GCCACGGCGT AGACGTGCGC
CCGGTCGACG TCATGTACAG CGACTGGGAC TGCACGCTCG AAGGCCTGCC GCATCCGCCG
GCAGTGCGCC TTGGGCTGCG CCAGGTGTCG GGCCTTAAGG CGGAGTCCGT GCAGCGCCTG
GTCGCCGCGC GTCAGGAGGC CCCGTTCGAC AACGCCGAGG ATCTGGCTCG ACGGGCAGCA
CTGGAGCAGC ACGAGATGAA GCTTCTGGCG GCGGCCGACG CACTCATGAG CCTCTCGGGC
CACCGGCGTC AGCAGGTATG GGACGCCGCG GCCCTGCGGT CGACTCCGAA GTTGCTTCGA
GACGCGCCGG TCGACGAGGA GTTCCTCGAG CTACCGGAGG CGCCCGAGGG AGAGGAAATC
GTCTGGGACT ACGCCTCAAC GGGTCTCACA CTGCGCCGGC ATCCACTCGC CCTTCTTCGC
CCCCAGCTCG AGGCTCGTCG ACTCCTTACG GCCGAGCAGC TGGACCGGCT GCCAAACGGG
CGGCACGTGG GCACCTGCGG CATCGTGACC CTCCGTCAGC AGCCGGATAC GGCCAACGGC
GTCATCTTCG TCTCGCTCGA AGACGAAACC GGCGTGGTCC AGGTGATTTG CTGGAAGAGC
ATCCGCGAGC AGCAGAGAGC GGAGCTTCTG AAGTCGCGGC TGCTCGCCGT GTACGGGAAG
TGGCAGCGGC AGGGCGATGT GCGCAATCTC GTCGCGGAGC GGCTCGAAGA CTTGACCCCC
CTCCTTGGCC GTCTGACGAC CGAGTCAAGG AACTTCCACT GA
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| Protein sequence | MLHMGIPAYA ELRCLSAFSF LRGASMPEEL VERAKELGYS ALAITDECSV AGVVRAHVTA
KEQGLPLIIG SQFQLEDAPF TLVVLAQTLQ GYGNLCEFIT KLRMASPKGT YRLQLTDVLP
GPLAECLVLV APDRTAFPEE LLKVARWMLT HFSGRCWLAV ELLRLLDDEM WLHKLREVSE
LTAIPLVATG DVHVHVRSRK ALQDVMTATR VGKPLTGCGG ALQPNAERHL RTRLRLAQTY
PEELLTETSR VASLCSFSLD ELKYQYPAEV VPVGETASSF LRRLTYEGAG RRWPEGMQAK
VQTQIEHELK LISELGYEHY FLTVADIVNF ARSRHILCQG RGSAANSVVC YCLGVTEVDP
ARMSVLFERF ISKERNEPPD IDVDFEHERR EEVIHYLYGK YGRHRAGLTA TVISYRPKSA
IRDVGKALGF DLETVDRVAK NHMWFEGRQV LTERMAEVGL NPEDLAVKQL LALTGQLIGM
PRHLSQHVGG FVLTKGPLSR MVPIENAAME DRTVIEWDKD DLDALGLLKV DVLALGMLTA
IRKSLEFIGQ RKGYRFEMQD IPAEDPETYR MISKADTVGV FQIESRAQMS MLPRMKPECF
YDLVIEVAIV RPGPIQGGMV HPYLNRRQGK EPVVYPSEAL KEALGRTLGV PVFQEQVMQV
AILAAGFTPG EADQLRRSMA AWKRKGGLDQ YYSRIVDGMT ARGYEKAFAE QIFQQIHGFS
EYGFPESHAA SFALLVYASC WIKCHHPAEF LAAMLNSQPL GFYTPSQLVQ DAKRHGVDVR
PVDVMYSDWD CTLEGLPHPP AVRLGLRQVS GLKAESVQRL VAARQEAPFD NAEDLARRAA
LEQHEMKLLA AADALMSLSG HRRQQVWDAA ALRSTPKLLR DAPVDEEFLE LPEAPEGEEI
VWDYASTGLT LRRHPLALLR PQLEARRLLT AEQLDRLPNG RHVGTCGIVT LRQQPDTANG
VIFVSLEDET GVVQVICWKS IREQQRAELL KSRLLAVYGK WQRQGDVRNL VAERLEDLTP
LLGRLTTESR NFH
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