Gene Mpe_B0606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_B0606 
SymbolalkB 
ID4787449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008826 
Strand
Start bp558268 
End bp559470 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content57% 
IMG OID640093027 
Productalkane 1-monooxygenase 
Protein accessionYP_001023605 
Protein GI124263135 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00127289 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTCGA GCTTGCCAAA CAACGACAGC GGCGGGTCCG GGGAGACGCG ATATCGCGAT 
ATGAAACGGT ACGCATGGCC CATCGGCGTT TTGTGGCCGA TGTTGCCCGC CATCGGCATT
GCGGCTGCTC AGTTGACCGG GAAGGCAGCG TTCTATTGGC TCGCCCCCTT CCTGACTTTT
GTCGTGATTC CCCTCCTCGA CATGGTTATC GGAAGCAGCC AAAAGAACCC GCCGGAAAGC
GCGATCAAAG CCCTCGAGGA CGACAACTAC TATCGGAACC TGACGTTCGT CACGGTGCCC
GTTCACTACC TTTCGATGAT CACTGGCGCC TGGGCGGTTG GAACGCTCGA CCTTACCGGG
CTCAACTATG CAGGAATCTG CATCTCCGTG GGTCTTGCCA ATGGTCTTGC GATCGTTACT
TCCCACGAGC TTGGTCATAA GAAGGACGCA CTCGAACGCT GGATGTCCAA GATCTGCTTG
GCGGTCACGG CCTACGGCCA ATACATGATC GATCACAACC GTGGTCATCA TCGGGATGTT
GCTACTCCTG AGGACTCCAG TTCCGCTCGC ATGGGTGAGG GCATCTATTT CTTCGCGCTG
CGCGAACTCC CGTACACGGG ATTTATTCGA CCCTGGCGCC TGGAGAAGGA ACGCTTGGCG
CGCAGCGGCA AAGGTCCCTG GACGCTGGAG AACGAATTCC TCCAGCCGGC TCTGATCTCG
CTGGTCTTCT ACGGTGCCCT GATCGTCTGG CTGGGTTCGA GCATCATCCC GTACCTGCTT
GCTACCGCCT TCGGTGGCTA CTGGTTTTTG GTGATCGCGG ACTATATAGA ACACTACGGG
TTGCTTCGTC AGAAGCTTCC TGACGGACGT TACGAGCGGG TCCGACCTGA GCACTCATGG
AACACTGATC ACATTGCCTC GAATGTGATC TATTTCCATG TGCAGCGACA CTCGGATCAC
CACGCGTTTC CGACGCGTAG CTACCAAGCC CTTCGTAGCT ATAGCGACGT ACCCACAATG
CCGTCCGGAT ATCCGGGGAT GATTTGGCTC TGTCACATCC CGCCGCTGTT TCGAGCCGTC
ATGGATCCGC TTTTGCTCAA GCAGTACGAC GGCGACCTCA CCAAGATCAA CATCGATCCA
GGGAAGCGCA GCAAGCTATT CCGACGTTAT GCCAATCAGC TGGCGCAGCC CGTCCGTGAC
TGA
 
Protein sequence
MISSLPNNDS GGSGETRYRD MKRYAWPIGV LWPMLPAIGI AAAQLTGKAA FYWLAPFLTF 
VVIPLLDMVI GSSQKNPPES AIKALEDDNY YRNLTFVTVP VHYLSMITGA WAVGTLDLTG
LNYAGICISV GLANGLAIVT SHELGHKKDA LERWMSKICL AVTAYGQYMI DHNRGHHRDV
ATPEDSSSAR MGEGIYFFAL RELPYTGFIR PWRLEKERLA RSGKGPWTLE NEFLQPALIS
LVFYGALIVW LGSSIIPYLL ATAFGGYWFL VIADYIEHYG LLRQKLPDGR YERVRPEHSW
NTDHIASNVI YFHVQRHSDH HAFPTRSYQA LRSYSDVPTM PSGYPGMIWL CHIPPLFRAV
MDPLLLKQYD GDLTKINIDP GKRSKLFRRY ANQLAQPVRD