| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0601 |
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| Symbol | |
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| ID | 4787444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | - |
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| Start bp | 552731 |
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| End bp | 555436 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640093022 |
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| Product | ATP-dependent transcriptional regulator-like protein protein |
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| Protein accession | YP_001023600 |
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| Protein GI | 124263130 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00000493174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGGAGACGA GAATGCATAA AGCGGCCTCC TGGATTCTTA AGCCGGAGCG CTGGAAGTTG
CCTGCGGCGT TTCGCACTGT GTCTCGGCCT GTGTTTGCCG TGAGCGCCCC GGCTGGCTAT
GGCAAGTCGA CCCTGCTGAG CGAGTGGAGA GAAGAAGTCA TCGCACTGGG TTACCGTGTC
GTTTGGCTAC TGGTTGACGG CGATGATCAG GATGGCGATA AGCTCGCGAT CGATTTGCTC
CACGCCTTTT CTCCAGCCGA TACGGAACGA TCGCAGTCAT TGGTCAACGG CGTTGGTGAC
CGCGGGAAAC GCGCCGTAAT CATGGCCCTG GTTGCGGAAA TGGCTTCACG CCAGGAGCGG
ACTGTATTGT TCGTCGATGA CGTTCATTGG CTGTCAGACA ACACGGCCGC GACCCTTTTA
CGCCCGTTAA TTCGTCACCA GCCTGAACGT ATGGCGTTGG TGTTGAGTGG GCGTGCCAAT
TTGAGTTCGC TTTCCAGCGA GGCGGCTCTC GATCGCCGCT TACACGTCGT TGACCATATT
CAGTTGGCAT TCAACCAGTC GGATATTGCA CAGATTCTGA GGCAGTACAG TGTCAAGCCG
AGACAGGCAT TGGTACAGGC CATCTATGAA CGCAGCGAGG GTTGGCCAGC GATCGTGCGA
CTCATTGCGA TGACTCTGCA CAGCGATGAA GAAAGTCAAA ATAATCTGTT GCAAGGCCTG
CTGGAGCGAC CACAGGCCAT TTCGGAGTAC CTGAGCGAAG TTCTCCTATC GCAGTTGCCG
GATCGCGCTG CTCAGTTGTT GCTCTGCCTC GCGATGTTGC GGCGGTTCAA TGGCCGCTTG
GTGGCTGCTG CGACAGAAAT GAGCGACGCA GAGGCTGTCC TTGCCGAATT GCAGCGGCGC
GCGCTCCCTA TTAGTCGCAG CAATGACGCA ATGCTTCCGT ATGCACTGCA TCCAATTGTG
CGAGATTTCC TGTTGATAAG AATACGCCGA CAGGGTATCA ATCAAATCGG CCCATATGTC
GAGCGTGCAC TCGCCTGGTT GACTGACAAT GGTCGAATCG ACGCCGCCAT CGATCTAAGC
TTAGACGTCG GCAACGTCAA GAACGCTGCG GCGTTGATAG ACCACTATGC GCGTACGATG
GCGCGGTATC AGGGCCGTCA TGCTACGTTC CTTTATTGGG CGAACAAGCT TCCACTGGAG
GCCCTGGCGC AATTCCCGGA GATCAGGGTG AAGCAAGCCT GGTCACTCGC AGTCCTTAGA
CGAGCTGCAG AGGCGAAAGC CGTACTTGCT AAACTCATAA TTGAATTCGC CGAACCGACA
AACAGACCCG ATGCAGCTTC GCATGGGTTC GACGACCAGC GCTTGAGCCG CATAAGGCAG
GCAGTTGAAC TGGAAAGGTG CACCGTACCT ACCCTCTGCG ATCGAGCACA GGATGCCGCG
CCATACGCAC GAAGCTGGTT GTCGCGCTGG CCGGACGCAG AACCTATCGA TCTGGCTATC
GCTAACATCG TGGTGGGATG CGGTGCGATG GCCGACACTG ACTTTGAAGT CAGCCTAGCG
CATCTGCGAA CTGCCCAACG ATATGTAGAC GAATGCAAGG GGTACTACGT CAAAGCCTGG
GTCGATATGT GGCTAGCAAC GGTTTTAAGC AAGCAAGGGC GATATCGACA GGCCCTTTAC
GAGTGCGACG AGGCAGTGAC AGCGGTCGCC ACGCATCTTG GTGGGGAAAC TGCTGTGGAG
ATCATGCTAC ACGCGATCCG AGCTCCGCTG CTTTACGAGA TGAATCGGCT GGAAGAAGCG
GGTGCGGCGC TTGAGCATGG CCTCACTGCA CTCATTGAGC AAACCTCGGT CGACTCCATT
ATTATGGGCC ACGTTGCGCT AGCGAGGCTG CAGAACGCTC AAGGCTCCCA TCTCGACGCA
CTCGAAACGC TTGCTGAAGG TGAAGTGATC GGCAGGACGC ACGGTCTGTC CCGGCTAGTC
GTGGCTTTGG CGGCAGAGCG GATTGACCTC CTTCTGAGAC ATCGCGAGCT TGGCCAAGCG
CAGGCACAGT GGCTAGAGTT GCAGAACTTC TCGGAGTGCG GTCCCGCCGA TGCGTTTGAG
AGCGCGATGT CTGACAAGGC CCCACGCATC GAAAGCCGGA TAGCGTTGTT GAAGGGGAAC
AATTCAGTTG CCTGCGAACT CACCGAGCCT GCGTTACAGC GAGCGATTCG GACCGGCCAG
AAAAGGAAGC AGGTCGAACT TCTATTGATT CGGGCCCTTG CCGCCCAGGC CGGGAAGGAA
CATGAGAGGG CTGGGGACGC TCTTCAAAGG GCTATCGAAG TCGCGATGTC GGAAGGTTAT
GTCCGAGTAT TCGTAGACGA GGGTGAGCAG ATGCGGTTGC TGCTTATCTC CGCTGCGGGA
TTGGCGGCCC GGGCCAGTTC TCCTACCGGC GAGTATCTGC GCCAGATCCT GGCTGCCTTC
AGTGTTCAAA AGAGCGATCC AAAGACGTCG GCGTTCATAG CCGGGGCCGA GTCGCTTACG
GGGCGTGAGC TGAAAATCTT GCGGAGGTTG CAATCGGACC TATCCAATCG GCAGCTTGCC
GATACGCTGT ACATCACCGA GGGCACACTG AAATGGCACT TGAAGAACAT TTACGGAAAG
TTGAACGTGA CTAACCGCCT GACGGCTGTC ACCGCAGGGA GAAAACTTGG GCTGTTAGAT
AGTTGA
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| Protein sequence | METRMHKAAS WILKPERWKL PAAFRTVSRP VFAVSAPAGY GKSTLLSEWR EEVIALGYRV
VWLLVDGDDQ DGDKLAIDLL HAFSPADTER SQSLVNGVGD RGKRAVIMAL VAEMASRQER
TVLFVDDVHW LSDNTAATLL RPLIRHQPER MALVLSGRAN LSSLSSEAAL DRRLHVVDHI
QLAFNQSDIA QILRQYSVKP RQALVQAIYE RSEGWPAIVR LIAMTLHSDE ESQNNLLQGL
LERPQAISEY LSEVLLSQLP DRAAQLLLCL AMLRRFNGRL VAAATEMSDA EAVLAELQRR
ALPISRSNDA MLPYALHPIV RDFLLIRIRR QGINQIGPYV ERALAWLTDN GRIDAAIDLS
LDVGNVKNAA ALIDHYARTM ARYQGRHATF LYWANKLPLE ALAQFPEIRV KQAWSLAVLR
RAAEAKAVLA KLIIEFAEPT NRPDAASHGF DDQRLSRIRQ AVELERCTVP TLCDRAQDAA
PYARSWLSRW PDAEPIDLAI ANIVVGCGAM ADTDFEVSLA HLRTAQRYVD ECKGYYVKAW
VDMWLATVLS KQGRYRQALY ECDEAVTAVA THLGGETAVE IMLHAIRAPL LYEMNRLEEA
GAALEHGLTA LIEQTSVDSI IMGHVALARL QNAQGSHLDA LETLAEGEVI GRTHGLSRLV
VALAAERIDL LLRHRELGQA QAQWLELQNF SECGPADAFE SAMSDKAPRI ESRIALLKGN
NSVACELTEP ALQRAIRTGQ KRKQVELLLI RALAAQAGKE HERAGDALQR AIEVAMSEGY
VRVFVDEGEQ MRLLLISAAG LAARASSPTG EYLRQILAAF SVQKSDPKTS AFIAGAESLT
GRELKILRRL QSDLSNRQLA DTLYITEGTL KWHLKNIYGK LNVTNRLTAV TAGRKLGLLD
S
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