| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0595 |
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| Symbol | |
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| ID | 4787438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | - |
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| Start bp | 546474 |
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| End bp | 548894 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640093016 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001023594 |
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| Protein GI | 124263124 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.115384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000495016 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTAGAA ATGACCTAAG GCACCGGCTC GCCCGTTTCA CTCTAGGCAA CCGATGGACA
ATCCTGGTTG CCATGGCGTT GATCACGACC TTCTTCGCCG TCGGCATGAC CAAGGTCGAG
ATCCGGACGA TCTTCTCGGA CCTCTTTCCC AAGGATCACC CCTTCGTTCA GGTCTTCAAG
GACCATCCGA ACTTCGGCAG TCCACTGACC GTCACGCTGA TGATCAAGCG AACGGACGGC
AAGGACGTCT TCCAGATCGA TACGCTTGAC AAGGTCTGGC GCCTATCGCG CGCGATCGAT
CTCGCTCCCG GCGTCGACCA CGATCAGATT CTTTCGATCG CGTCGTCCAA GGCCCGGTAC
ACGGTCGTCA CCCCGGACGG GATCTTCTCG AACCCGATCA TGGACGAACA GCCGCCTAAG
TCGGCCGCAG ACCTGGCGGA GATCCGTCGC CGGGTAGGTG AGTCGGCGGC CGCGGCAACG
TTCCTCGTGT CCTCTGACCA CACGGCGACG ATCATCAATG CCACCTTTAT CGAGAGCAAG
CTTGACTACG GCGAGGCGTT CAACTTCATC CAAGAGATAG TCAAGAAGGA GCAGGACGGT
CAGCATGAGA TCCACGTCGC CGGCTTCCCG ATCATGACCG GTTGGATCTA TGCCTTCGGC
GAGAACACCG CTGAGATTTT TGGCCTCACG CTGCTCCTCA TGTTCGTGAT GCTCGCACTC
CACATGCGCA ACCTTTCGGG CATCGTTGGA CCGCTGATCG TGAGTTCGGT GTCGGCCGTC
TGGGGGTTCG GGCTTGTCGG CTGGCTCGGA CTACCGGTCG AGCCGCTGCT GATGGTTGTG
CCCCTGATGC TCATCGCGCG CTGCTTCAGC CACTGTGTTC AGGCTACTGA GCGCTACTAC
GAACTGCTTC ACGACGGCCA TGAGCAGCGC AAAGCTGCCG AGCTGTCGCT CGTCTCCCTT
ATGGCGCCCG GCACCCTAGG GATCTTCACC GACGTTTGCG GACTTCTGCT TGTCGCGCTT
GCGCCCATTC CGGCGATGGA GCGATTCGCA CTGTTCACCG GCCTTTGGGC GCTGAACCTC
GTCCCCTGTA GCGTCTTCCT TACCCCCGTC GTGCTGAGCC TGCTGCCGAA GCCAACGAAC
CTATCTCATG TCCTCGGCAG CGTTGGTCAC AGCGGCCCGC TTCAACGCAG CATGCGGCGC
ACGCTGGAGG CGTTCTCCAG CTTGGCTCAT GGGCGGACGG CATGCTACAC GGCAGGCATA
TTTGTCTTAA TTACTGTGGT TTCGGTGTAC TTCATGTTGC GCATCCCGGT CGGCAATCCG
GTCGAAGGGA CGAATCTCCT GCGTTATGAG TCGGAGTTCA ATGCCGCCGT CCGGGAGATC
AACAGGAACT TTCCCGGATC GATGACGATG GAGCTTGTCT TTGAGGGCAA GGGCGGCGCC
CGCATCGTGC GTCAGACCGA GACAATCACC GCGATGCGAG ATCTCCAGCA TTGCCTGGAG
GCCAGCCCAA ATCCGCCCAC AGCCACGCTG TCGTTCGCCG ACCTCGTGCC GGAAGCCAAC
CGCGTCTTCA ACGGCGGCAA TCCAAAATGG ACGCCGCTGG ACAACGACGA TGCCGCCGTC
GCGGCAGCGG TCACGGGCCT GATGGCAGGA ACGAATGCCA AGGCCTTCCT GAACGTCACG
GACTTCGACC AGCGCAACAC GACCGTATCG CTCTGGTACG CCAACAACAA GCAGCATACG
GTAGACAACG CCTTAGCTCA GGCGAGTGCT TGCGTTGAGA AGATTGGAGC AGAGCATACA
AACTTTCGCG TTCGCTTGGC TTCCGGCACG ATCGCTTTGC AGCAGTCGAT CAACGACACG
GTGGTGCACT ACGAGTCTCG AATCATCGGC GCGCTAAATA TCGTGATTCT CATCGGCTGC
TCCCTGGCCT ATCGCTCGAT CGTGGCCGGT TTGCTGCTGC TGATCCCGGT GAACCTGGCT
AACACCATGC TCACGGCCGC GATGTCTCTC GCCGGCCTCG GGCTCGACGT GAACACGCTG
CCCATCCTGG CCATCGGAAT CGGAGTCGGC ATCGACTACG GCATCTACTT GCTCACGCGG
ATCTGCGAAG AATACCAGGG GGCGGCCAGG AAGGATCTCG GAGCGGCCAT CCGCATTTCG
CTTGCGACCT GCGGCAAGGC CATCTTCTTC ACCGCGGCAT TGATGACCAT CGGGCTGTTG
CCCTGGTACT TCCTGTCGGA GCTGAAGTTT CTGTCCGACA TGGGTCTGCT GCTCGTGATT
GTGATGTTTA TCAACATGGT CCTGGCGCTG ATCCTCCTTC CGCTGCTCGT CTACTTGATC
AAACCGAAGT TCCTCGACAG CGACATGTCG GGATTGTCGG AGTCCGTGGA GAAGAGACCA
CAGATGGCGG TACCTGTCTA A
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| Protein sequence | MGRNDLRHRL ARFTLGNRWT ILVAMALITT FFAVGMTKVE IRTIFSDLFP KDHPFVQVFK
DHPNFGSPLT VTLMIKRTDG KDVFQIDTLD KVWRLSRAID LAPGVDHDQI LSIASSKARY
TVVTPDGIFS NPIMDEQPPK SAADLAEIRR RVGESAAAAT FLVSSDHTAT IINATFIESK
LDYGEAFNFI QEIVKKEQDG QHEIHVAGFP IMTGWIYAFG ENTAEIFGLT LLLMFVMLAL
HMRNLSGIVG PLIVSSVSAV WGFGLVGWLG LPVEPLLMVV PLMLIARCFS HCVQATERYY
ELLHDGHEQR KAAELSLVSL MAPGTLGIFT DVCGLLLVAL APIPAMERFA LFTGLWALNL
VPCSVFLTPV VLSLLPKPTN LSHVLGSVGH SGPLQRSMRR TLEAFSSLAH GRTACYTAGI
FVLITVVSVY FMLRIPVGNP VEGTNLLRYE SEFNAAVREI NRNFPGSMTM ELVFEGKGGA
RIVRQTETIT AMRDLQHCLE ASPNPPTATL SFADLVPEAN RVFNGGNPKW TPLDNDDAAV
AAAVTGLMAG TNAKAFLNVT DFDQRNTTVS LWYANNKQHT VDNALAQASA CVEKIGAEHT
NFRVRLASGT IALQQSINDT VVHYESRIIG ALNIVILIGC SLAYRSIVAG LLLLIPVNLA
NTMLTAAMSL AGLGLDVNTL PILAIGIGVG IDYGIYLLTR ICEEYQGAAR KDLGAAIRIS
LATCGKAIFF TAALMTIGLL PWYFLSELKF LSDMGLLLVI VMFINMVLAL ILLPLLVYLI
KPKFLDSDMS GLSESVEKRP QMAVPV
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