| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0568 |
|---|
| Symbol | |
|---|
| ID | 4787411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | - |
|---|
| Start bp | 515612 |
|---|
| End bp | 516544 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640092992 |
|---|
| Product | putative branched-chain amino acid transport system permease |
|---|
| Protein accession | YP_001023570 |
|---|
| Protein GI | 124263100 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.451582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0433103 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGCT TCCTACTCGA GACTCTCATC GGCGGCCTGA TGTCGGGCAT GCTGTATTCG
CTGGTCGCGC TCGGCTTCGT GCTGATCTTC AAGGCCTCCG GCGTCTTCAA CTTCGCGCAA
GGCGCGATGG TGTTGTTCGC GGCGCTCGCG ATGGCGCGCT TCGCCGAGTG GATCCCGTCG
CTGCTGGGCA TCCACAGTCG GCTGGTGGCC AACGTGCTCG CCTTCGCGGC GGCGATCGCC
GTGATGGTCG CCGTGGCCAG GGCGGTCGAG AGGCTGTGCC TGCGCCAGCT GGTCAACCAG
GAGGGCGTGA CCTTGCTGAT GGCCACGCTG GGCATCGCGC ACTTCCTCGA CGGCTTCGGC
CAGAGCCTCT TCGGCAGCGA CATCTACACC ATCGACGTTG GCCTGCCCAA GGACCCGCTG
ACGGTGCTGG AGAGCACCCT GCAGGGCGGA TTGCTGATCA GTAAGGAGGA CTTGTACGCT
GCCGCGATCG CCACCGCGCT GGTCGCGCTG CTGGCGCTGT TCTTCCAGAA GACCTCCACC
GGCCGCGCGC TGCGCGCGGT GGCCGACGAC CATCAGGCCA CGCAGTCGAT CGGCATCCCG
CTCGACCGCA TCTGGGTGAT CGTCTGGAGC GTGGCGGGCT TCGTCGCGCT GGTGGCCGGC
GTCATCTGGG GCAGCAAGCT GGGCGTGCAG TTCTCGCTGT CGCTGGTGGC GCTGAAGGCC
TTGCCGGTGG TGATCCTCGG AGGCCTCACG TCGGTGCCGG GTGCCATCGT CGGCGGCTTG
ATCATCGGCA TGGGCGAAAA GCTTTCCGAG GTCTACCTCG GCCCGGCGCT CGGTGGCGGC
ATCGAGATCT GGTTCGCCTA TGCGCTGGCG CTCGTCTTCC TTCTCCTGCG GCCGCAAGGG
CTGTTCGGCG AGAAGGTCAT CGACCGCGTC TGA
|
|---|
| Protein sequence | MMGFLLETLI GGLMSGMLYS LVALGFVLIF KASGVFNFAQ GAMVLFAALA MARFAEWIPS
LLGIHSRLVA NVLAFAAAIA VMVAVARAVE RLCLRQLVNQ EGVTLLMATL GIAHFLDGFG
QSLFGSDIYT IDVGLPKDPL TVLESTLQGG LLISKEDLYA AAIATALVAL LALFFQKTST
GRALRAVADD HQATQSIGIP LDRIWVIVWS VAGFVALVAG VIWGSKLGVQ FSLSLVALKA
LPVVILGGLT SVPGAIVGGL IIGMGEKLSE VYLGPALGGG IEIWFAYALA LVFLLLRPQG
LFGEKVIDRV
|
|---|
| |