| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0420 |
|---|
| Symbol | phnF |
|---|
| ID | 4787560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | + |
|---|
| Start bp | 374691 |
|---|
| End bp | 375407 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640092852 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001023430 |
|---|
| Protein GI | 124262960 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02325] phosphonates metabolism transcriptional regulator PhnF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.330179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCAAC GTGGCATCGG CGAGACCGTC TATCGACAAG TCCAGCGGCA GCTGGAAGCC
GAGATCCGCT CGCTGCATCG CCCGGGCGAC GCCCTGCCGC CGGAGGCCGC CCTGGCCGAG
CGTTTTGGCG TCAACCGGCA CACGCTGCGC CGCGCCCTTG AAGGGCTGAT CGCCGAAGGC
TGGGTCGAGC GTCGCCACGG GTTGGGCAGC TTCGTGCTGC ACAAGCCGCT GGACTACGAC
ATCGGCCAGC GTACCCGCTT CACGGAGACG CTCGAGGCCC AGGGTCGTGT CACCGAGAGC
ACGGTGCTGC GCAAGCTGCG CATCCCGGCC CAGGGCGGCG TGGCCCAGCG CCTGCAACTC
GACGAGGGCG AGCCGGTGGC CTGGATCGAG ACGCTGCGCA GCGTGGACGC GGCGCCGTTC
TGCGTCATCT CGCACTACCT GCCGCTGACC CTGCTGCCGG GCGTGCTCGA CGACTACAGC
GGCGGGTCAC TGCACGAATT CATCGAAGCA CAGCACGGCT GGCGCCTGAA GCGCACCGAG
AGCCTGGTCT CGGGGGCGCT CCCGCAAGGC GATGACGCCA GCCTGTTGGC GATGCCGGCC
CATGTGCCTG TACTTCGCGT CAAGAGCGTC AACGTGCGCG ACCGGGATGG AGCCCCGGTC
GAGTACGCCC TGACTCGGTT CCGCGCAGAC CGCATGCAAC TGCGCATCAC CCCTTGA
|
|---|
| Protein sequence | MIQRGIGETV YRQVQRQLEA EIRSLHRPGD ALPPEAALAE RFGVNRHTLR RALEGLIAEG
WVERRHGLGS FVLHKPLDYD IGQRTRFTET LEAQGRVTES TVLRKLRIPA QGGVAQRLQL
DEGEPVAWIE TLRSVDAAPF CVISHYLPLT LLPGVLDDYS GGSLHEFIEA QHGWRLKRTE
SLVSGALPQG DDASLLAMPA HVPVLRVKSV NVRDRDGAPV EYALTRFRAD RMQLRITP
|
|---|
| |