Gene Mpe_B0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_B0416 
Symbol 
ID4788044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008826 
Strand
Start bp370197 
End bp370541 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content62% 
IMG OID640092848 
Productnucleoid protein H-NS 
Protein accessionYP_001023426 
Protein GI124262956 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0193878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00866736 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCACCA AGACGTACTC AAAACTGATG AGGCAGATTG CCAAGCTGCA GCAGGAAGCG 
GAGGCAATCC GGCAGCGCGA GATTCAGGGT GTTGTCGCCC GAATTCGCGA GGCAATAGAG
CACTACCAAT TGACCGCCTC CGATCTCGGC TTTGGAGGCC CCAAACGCGG GCGTGGCGCT
GCTCGCAGCA AGGTGCCCGT CAAAGGTAAG GCCAAGCCCG CGGTTGGACG CGTTCGATTC
CGTGACGCCA ACGGCAACTC CTGGACCGGC CACGGCCGGC GTCCCAAGTG GTTCGTCGAC
GCGATCGCTG CCGGTGCGAC GCCCGAATCA CTCTCGGTGA AGTAA
 
Protein sequence
MATKTYSKLM RQIAKLQQEA EAIRQREIQG VVARIREAIE HYQLTASDLG FGGPKRGRGA 
ARSKVPVKGK AKPAVGRVRF RDANGNSWTG HGRRPKWFVD AIAAGATPES LSVK