| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0361 |
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| Symbol | traG |
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| ID | 4787989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008826 |
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| Strand | - |
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| Start bp | 311837 |
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| End bp | 313606 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640092793 |
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| Product | sex pilus assembly and mating pair formation |
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| Protein accession | YP_001023371 |
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| Protein GI | 124262901 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.398823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTTG CATCGATGTA CCGCGCCAAG ATCGGCGGCA CGGTGGACAC GTTGGCGATG
ACCGCGCTGG GCGCGGGAGC CATCCTGTCG TCGCCGGCGT TCGTCGAGTC CGGGGGCAAG
CTGTCGTTCC TCATGGCGGC GGCCGGCGCC GCGCACCTCG GGCGGCGCTT CCTGCAGCCG
TGGGAGGAGG CCAACGCCCT CGCCTCAAAG ATCAACGTCC GCTCGGCCGA CATGCTGTCC
AGCCCGGACG GCCTGCTGCT GGGCTACCGG ACCGACACCG GCGATCCGGT CTATATCCCC
GACGAAGACC TGATGCGGCA CGGCCTGATC GGCGGCCAGT CGGGTGTCGG CAAGACGGTG
CTCGGCAAGC TGTTGATGTA CCAGCAGATC CAGCGCGGCG GCGGCCTGGC GTTCGTCGAC
GGCAAGATGA ACGCCGAAGA CATCGAGACG ATCTACCAGT ATTGCTGCCT GTGCGGCCGC
GAGCAGGATC TGCTCATCCT GAACCCGGGC AATCCGGGCA TGAGCCACTC CTACAACCCG
ATCCTGCGCG GCGACCCGGA CGAGATCGCG GCGCGCGTGC TCTCGCTCAT CCCCTCGACC
GAGAACAACC CCGGCGCCGA CCACTACCGC CAGTCGGCCA ACCAAGGCCT GACCACGCTG
GTCGCAGCGC TGCAGGAGGC CGGCCTGGCC TTCAACTTCA TCGACCTGAC CATCCTGCTG
ATGAACCACA AGGCCATCGA GGAGCTGGAG TCGCGGCTGA AGCGCAGCAA GGGCGGCTCG
GCGGCGACGA AGAACCTCAG CCTGTTCCTC GAGCAGTACA AGGGCGGCGG CAAGCCCGGC
AGCGGCCTGG AGAACATGGT CGACATCAAG CGCATGAAGG AGACCTTCGG CGGCGTCGGC
GGCCGGATGT TCCAGTTCGG CACGGGCAAG TTCGGCGAGG TGCTCAACAC CTACTCGCCG
GAGATCGATC TGTTCGAGGC GATCCGCCAG AACAAGATCA TCTACGTGGC CCTGCCGACC
ATGGGCAAGA ACGAGGCGGC GGGCAACATG GGCAAGATGT TCCTGGGCGA TCTGCGCACG
GCGATCTCCT GGGTGCAGGC GCTGCCGGAA GACCAGAAGC CCCGGATCCC GTTCCTGGCC
TTCATGGACG AGCTCGGCTC GTACGCAGTC GCATCGCTGG CGCGCCCGTT CGAGCAGGCG
CGCTCGGCGC GGATCGCCCT CTTCCCGGCT TTCCAGACGC TGGCCAACCT GGAGGTCGTG
TCCCCCGACT TCGCCCAGAT GGTGCTGGGC AACACCTGGA CCAAGATCTT CTTCAAGCTG
GGCACGCAGG AGACCGCCGA ACCGGTGGCC GACCTGATCG GCAAGGAGAT GCAGATCGCG
AGGTCGATGA CGCACACGAA CAACCGCAGC GAGAACAACC CGCTGCTGGC CGTGGCGCCG
GAGGGCGGGG AAGGCGAAGG CATGGGCGTG TCCGAGGGTG AGCGCGAGGA AGAGCGCCAC
CGCGTCAGCC CCGAAGACCT GAAGGCGCTG GACAAGGGCG AGTGCGTAGT CCTGTACGGC
GGCGATGCCG TCTTCAACAT CCGCGTGCCG ATGATCTACG TCGACCCCGA GGTCGCGCGC
GAGATCGGGC CGCTTCGCAT TCACCACCGG CGCGAGCGCC AGGTCGAAGG CGCCGACTAC
TTCAAGAACA GCGATCGGTA CCTGGGCGGC AACTCCGTTC CGTCCGGGCA CCGCAAGCAG
ACGGCTCAGG AAATGCTGGC CGACGAGTAA
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| Protein sequence | MSFASMYRAK IGGTVDTLAM TALGAGAILS SPAFVESGGK LSFLMAAAGA AHLGRRFLQP
WEEANALASK INVRSADMLS SPDGLLLGYR TDTGDPVYIP DEDLMRHGLI GGQSGVGKTV
LGKLLMYQQI QRGGGLAFVD GKMNAEDIET IYQYCCLCGR EQDLLILNPG NPGMSHSYNP
ILRGDPDEIA ARVLSLIPST ENNPGADHYR QSANQGLTTL VAALQEAGLA FNFIDLTILL
MNHKAIEELE SRLKRSKGGS AATKNLSLFL EQYKGGGKPG SGLENMVDIK RMKETFGGVG
GRMFQFGTGK FGEVLNTYSP EIDLFEAIRQ NKIIYVALPT MGKNEAAGNM GKMFLGDLRT
AISWVQALPE DQKPRIPFLA FMDELGSYAV ASLARPFEQA RSARIALFPA FQTLANLEVV
SPDFAQMVLG NTWTKIFFKL GTQETAEPVA DLIGKEMQIA RSMTHTNNRS ENNPLLAVAP
EGGEGEGMGV SEGEREEERH RVSPEDLKAL DKGECVVLYG GDAVFNIRVP MIYVDPEVAR
EIGPLRIHHR RERQVEGADY FKNSDRYLGG NSVPSGHRKQ TAQEMLADE
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