| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0317 |
|---|
| Symbol | |
|---|
| ID | 4787945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | + |
|---|
| Start bp | 265156 |
|---|
| End bp | 266979 |
|---|
| Gene Length | 1824 bp |
|---|
| Protein Length | 607 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640092749 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001023327 |
|---|
| Protein GI | 124262857 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCA AGACGATTGA GTTGTTCCGC ATGGACGAAG TCATGCCCTC GATCGAGGAG
CGTGTCGAGT CCGCGACCAA GGCCATCAAG GCCATCTTCC TCGAAGGCCG GCCCGCCGTC
TGCGCGTTCT CGGGCGGCAA GGATTCGTCC GTCGTGGCGG CCCTGCTGCT GAACACCGCA
GCCGAGTTCG CTGCCGAGGG AGGCAAGCCG TTCGTTATCT TCACTACGGG CGACACGCTC
GTGGAGAACC CCGAGATCGT GGAGCACTAC CGGGCCGAGC TGGCCAAGGT GCGGCAGTTC
TGCAAGGAGC GCGGCATCAG GGTGCACACC AAGATCGTCT CGCCGACGTT CGCATCCTCG
TTCCAGTTGA GCATCCTCAG CGGGCGCGCG CTGCCGAGCT GGGCGGGCAC CAAGGGTGAC
TGCACCGTGA GCTACAAGAT CGTGCCCCAG CGTTCGTATC GCCGGAAGCT GTTCCGACAG
CTGAAGGACC AGAACCTCCC GGAAGCGGTG ACGCTGCTGG GAACCAGGTT CGACGAGAGC
GAGCGGCGTG CGATGCACAT GAAGGCGCGC GGCGATCGCG CTGACGTGCC GGTGCGCAAC
AAGGACGACG AACTCGTTCT TTGCCCGGTG GCCATGTGGT CGAGCGAAGA CATCTGGGAG
TACGTGGGTA TGGTCACCTC TGGTGTCTGG ACCGCGTTCA CCGACTTCGA GGAGACGATG
CGCATCTACT CTCACGCCGC AGGCACGTCC TGCGCAGTGG TGGCGGATGC GATCCACGAG
GGCGCGAAGG CCAAGAAGGG CGGCTGCGGC GCGCGTCATG GGTGCTATGT ATGCCTCCAG
GCAGAAGACA AGAGCCTGGA AGCGATGCTC GAGCACGACG AACGCTATGA GTACGCGCGA
GGCCTCAATC GGCTGAACAA GTTTCTCAGG GCGATCAGGT ACGACTGGAG CCGCAGGCAC
TGGGTGGGTC GCACGATCCG CGCGGGGTTC ATCGCGGTGC AGCCGGACAC GTTCCACCCG
TCGACGATCC GAGAGCTGAC GCGGTACATG ATGCAACTCG ACTACGACGA AACTGTGCGC
GCACGACGCG CCGGTGAACG TCCGAAGTTC CGCATCCTGC CCGACGACAT GCTGCTGGCG
CTGGACGCGA TCCAGAGCTT GAACGGCGTG GCCAAGCCCT ACCAGGTCTG GGCCGACAAG
CGCGACATCT GGGAGCGTGG CGTCCGCTAC GAGATCCCGG AAATCGAAAC GGCACCGAAG
ACCGACGTCC CCGACGCGCG GTTCCTCTAC GTCGGCGAAG ACTGGGACGA GACGGCGAAC
TACCTTGGCC TCACCGGCCT GCGCGACGCC TACATGGAAG CGCTGACCGA GGGCAGTGGC
TGCGCACCGG ACCTGAAGGT GCTCCCGAGC GGCGAAACCG CGTGGGACCT GGAAACCGGA
CAGTCGCTGG ATGTGGACAT CGAGAGCATG AGCCTCATGC TCGAGTTCGA GATGGATCGC
ATGCTCGAGA AGTTCGACAA CGGCTTCTTC CCGGGAGGGA TCACCGAGGC CTACAAGTGG
TACGTGTCAT ACGGCGTGCT GACCGTGTCG CACTCGCAGC AAAGCGAGCA CGACGAGGTC
TGCCGGCGCA CTGCCTACAA GGACCGACTT GGTCTGACCC TGGAGTACGA CATCGAGGAC
CTGCTGGCCA AGACGATCTC CTTCAGCCAA CTGCCACCGA ACGCGCGCAA GGCGTGGGCC
CACAAGGCCA CCACCGACTC CAGCCAGACC GACTTCCTGT CGACGCTGGA TGAGACGGTG
GAGGACATGC TCGAAGCTGC CTAA
|
|---|
| Protein sequence | MDTKTIELFR MDEVMPSIEE RVESATKAIK AIFLEGRPAV CAFSGGKDSS VVAALLLNTA
AEFAAEGGKP FVIFTTGDTL VENPEIVEHY RAELAKVRQF CKERGIRVHT KIVSPTFASS
FQLSILSGRA LPSWAGTKGD CTVSYKIVPQ RSYRRKLFRQ LKDQNLPEAV TLLGTRFDES
ERRAMHMKAR GDRADVPVRN KDDELVLCPV AMWSSEDIWE YVGMVTSGVW TAFTDFEETM
RIYSHAAGTS CAVVADAIHE GAKAKKGGCG ARHGCYVCLQ AEDKSLEAML EHDERYEYAR
GLNRLNKFLR AIRYDWSRRH WVGRTIRAGF IAVQPDTFHP STIRELTRYM MQLDYDETVR
ARRAGERPKF RILPDDMLLA LDAIQSLNGV AKPYQVWADK RDIWERGVRY EIPEIETAPK
TDVPDARFLY VGEDWDETAN YLGLTGLRDA YMEALTEGSG CAPDLKVLPS GETAWDLETG
QSLDVDIESM SLMLEFEMDR MLEKFDNGFF PGGITEAYKW YVSYGVLTVS HSQQSEHDEV
CRRTAYKDRL GLTLEYDIED LLAKTISFSQ LPPNARKAWA HKATTDSSQT DFLSTLDETV
EDMLEAA
|
|---|
| |