| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0154 |
|---|
| Symbol | |
|---|
| ID | 4787757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | + |
|---|
| Start bp | 132265 |
|---|
| End bp | 132861 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640092562 |
|---|
| Product | RNase HII |
|---|
| Protein accession | YP_001023167 |
|---|
| Protein GI | 124262697 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.142664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000294513 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTCGC TTCACCTCGA ACTGACCGCC GGCGTCGACG AGGCCGGCCG CGGCCCGCTC
GCCGGTCCCG TCGTGGCCGC CGCCGTCATC CTGGACCCGA GCCGCCCGAT CGATGGCCTG
AATGACTCGA AGCAGCTGAG CGCGAAGAGG CGCGATCGCC TGTTCGACCT GATCATCGAG
CGCGCCGCGG CCTACTGCAT CGCCGAGGCA TCGGTCGAGG AGATCGACCG CCTGAACATC
CTGCAGGCCA CCATGCTGGC CATGCAGCGC GCCATCGCCG GCCTGAGCGT GACGCCCCAG
CTGGTGCTGA TCGACGGCAA CCGGTCGCCG CTGCTGCCCA TGCGCTCCGA GGCGATCGTC
AAGGGCGACG CCAGGGTGAC CAGCATCGGG GCGGCGTCCA TCCTGGCCAA GGTGCACCGC
GACCGCCTGT GCGCCAAGCT CCACGAGACC TTCCCTTTGT ACGGTTTTGC TGTGCACAAG
GGGTACGGCA CGGCCGATCA CCTGGCAGCC TTGGTCCAGC ACGGGGCCTG TCCCGAGCAC
CGTCGCACGT TCTCACCGGT TCGCGCCGCG CTCGCGCGCG CAGCTGCACA CGCCTGA
|
|---|
| Protein sequence | MQSLHLELTA GVDEAGRGPL AGPVVAAAVI LDPSRPIDGL NDSKQLSAKR RDRLFDLIIE
RAAAYCIAEA SVEEIDRLNI LQATMLAMQR AIAGLSVTPQ LVLIDGNRSP LLPMRSEAIV
KGDARVTSIG AASILAKVHR DRLCAKLHET FPLYGFAVHK GYGTADHLAA LVQHGACPEH
RRTFSPVRAA LARAAAHA
|
|---|
| |