Gene Mpe_B0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_B0087 
Symbol 
ID4787690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008826 
Strand
Start bp78616 
End bp79443 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content65% 
IMG OID640092496 
Producthypothetical protein 
Protein accessionYP_001023101 
Protein GI124262631 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000976689 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGATC TGAACCGCGT CTTTGGACAG GCCACACGAC TGCCGCATCT GCCGGAAGTC 
GTCTTGGAGC TCGACCGCGT AACGCGAAGC GATGGTTCGG ACATGCGTCA GATCGCCGAT
GTGATCGCCA AGGACCAGGT GGTGGCCGCG AAAGCGCTGC GCCTGGCCAA CAGCGCCTTC
TACGGAAGCA AGGGCAGCGT AGGCACGATC GAGCACGCGA TTCGGGTGCT CGGAATCAGC
GATTTCAGGG TGCTGGTCCT CGCGTCATGC GCAATGTCTG CAGTCGGGAC CGTTCGTGGC
GTGGACATGA CCAACCACTG GATGCACAGC GCCATCGCTG GGCAGGTGGC GGCGGCGATC
ACGGCGCGAG GCAGTAGCGA GGGGTCTTCG GCGTTTGCCG CAGGCCTGCT GCACAGCTTG
GGCGTGCTCG TCATGCACCT CACTCTGCCG GATGAGGCTC AGCAGGTGCG CGATCGGTCA
GTCGCCATGG ACCTTCCGGC ACGTGCCGCA GTCGAGAAAG AAGTGCTTGG ATTCGATCAT
GCCCAGGTCG GTGGCGAGCT CCTGAGGCGG TGGGGTTTGC CAGCGACGAT CACTGAGGCA
GTGCAGCAGT ACATCGCGCG TGACGCAGCG CCACGCGGGC TCCCTTCGGC CGTCTACTGC
GGGAGCGTGT CGGCGAGCGG CGCGCTGAGA GGGGACGGCA TCGAGTCGGT GCTCGAAGGC
ATCGGTGGCG AAACTCTCGG CTCGCTAGGC GTGGAGCAGA AGTGGCTGGC GGATCAGCTG
AAGCGAAGCG CCGACCAGGC TGGAGCACTG GTCTCAGCCA TCTCATGA
 
Protein sequence
MSDLNRVFGQ ATRLPHLPEV VLELDRVTRS DGSDMRQIAD VIAKDQVVAA KALRLANSAF 
YGSKGSVGTI EHAIRVLGIS DFRVLVLASC AMSAVGTVRG VDMTNHWMHS AIAGQVAAAI
TARGSSEGSS AFAAGLLHSL GVLVMHLTLP DEAQQVRDRS VAMDLPARAA VEKEVLGFDH
AQVGGELLRR WGLPATITEA VQQYIARDAA PRGLPSAVYC GSVSASGALR GDGIESVLEG
IGGETLGSLG VEQKWLADQL KRSADQAGAL VSAIS