Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_B0087 |
Symbol | |
ID | 4787690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008826 |
Strand | - |
Start bp | 78616 |
End bp | 79443 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640092496 |
Product | hypothetical protein |
Protein accession | YP_001023101 |
Protein GI | 124262631 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1639] Predicted signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000976689 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGATC TGAACCGCGT CTTTGGACAG GCCACACGAC TGCCGCATCT GCCGGAAGTC GTCTTGGAGC TCGACCGCGT AACGCGAAGC GATGGTTCGG ACATGCGTCA GATCGCCGAT GTGATCGCCA AGGACCAGGT GGTGGCCGCG AAAGCGCTGC GCCTGGCCAA CAGCGCCTTC TACGGAAGCA AGGGCAGCGT AGGCACGATC GAGCACGCGA TTCGGGTGCT CGGAATCAGC GATTTCAGGG TGCTGGTCCT CGCGTCATGC GCAATGTCTG CAGTCGGGAC CGTTCGTGGC GTGGACATGA CCAACCACTG GATGCACAGC GCCATCGCTG GGCAGGTGGC GGCGGCGATC ACGGCGCGAG GCAGTAGCGA GGGGTCTTCG GCGTTTGCCG CAGGCCTGCT GCACAGCTTG GGCGTGCTCG TCATGCACCT CACTCTGCCG GATGAGGCTC AGCAGGTGCG CGATCGGTCA GTCGCCATGG ACCTTCCGGC ACGTGCCGCA GTCGAGAAAG AAGTGCTTGG ATTCGATCAT GCCCAGGTCG GTGGCGAGCT CCTGAGGCGG TGGGGTTTGC CAGCGACGAT CACTGAGGCA GTGCAGCAGT ACATCGCGCG TGACGCAGCG CCACGCGGGC TCCCTTCGGC CGTCTACTGC GGGAGCGTGT CGGCGAGCGG CGCGCTGAGA GGGGACGGCA TCGAGTCGGT GCTCGAAGGC ATCGGTGGCG AAACTCTCGG CTCGCTAGGC GTGGAGCAGA AGTGGCTGGC GGATCAGCTG AAGCGAAGCG CCGACCAGGC TGGAGCACTG GTCTCAGCCA TCTCATGA
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Protein sequence | MSDLNRVFGQ ATRLPHLPEV VLELDRVTRS DGSDMRQIAD VIAKDQVVAA KALRLANSAF YGSKGSVGTI EHAIRVLGIS DFRVLVLASC AMSAVGTVRG VDMTNHWMHS AIAGQVAAAI TARGSSEGSS AFAAGLLHSL GVLVMHLTLP DEAQQVRDRS VAMDLPARAA VEKEVLGFDH AQVGGELLRR WGLPATITEA VQQYIARDAA PRGLPSAVYC GSVSASGALR GDGIESVLEG IGGETLGSLG VEQKWLADQL KRSADQAGAL VSAIS
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