| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0060 |
|---|
| Symbol | |
|---|
| ID | 4787663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | - |
|---|
| Start bp | 51199 |
|---|
| End bp | 51762 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640092469 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001023074 |
|---|
| Protein GI | 124262604 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.00816784 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAG CTGTAGCAAT CGACTTGGCG CAGCGCGCCT CCGTGGCGGA AGTACGCTCC
TCTCCTGGCG CCGCTGCGCA GCCGGCCTGG TACCGCCCCG TCACTGCTCA GTGCCTGGTG
GAAGAGGCCG GCCGGCAAAG ACTGGAGCTC GTGAAGCTGC TTGCGGTGAT GAAGGCGGAG
GGCGGCCGCG TAGGCATGTT CAGCCGGAAC ACGGACGGCT CGTACGACAT CGGCCCGATG
CAGGTCAACA CCATTCACCT GCCCGAGCTT GCCAAGCTCT TCAACCGCTC CGCCGGTGAG
GTGGCGCGGC TCATGGCCTA CGACGGGTGC TTCAACGTCG CCGTCGGGGC CTGGCTGCTG
CGCAAGCGCA CCAACGAGGC CGATGGCGAC TTCTGGTATG GCATCGGCCG CTACCACAGC
AAGACACCTG TCCACTCTAC GCGCTACATC CTCCGCGTGC ACAGCGTCAT GCAGGACATC
GTGAAGAAGA GCCTGGCGGA CGACGCCAAG GCACGGACCG TGACATACGC CGGTGCCGCA
GCTCCGGAAC AGCAAGGGCA GTGA
|
|---|
| Protein sequence | MLEAVAIDLA QRASVAEVRS SPGAAAQPAW YRPVTAQCLV EEAGRQRLEL VKLLAVMKAE
GGRVGMFSRN TDGSYDIGPM QVNTIHLPEL AKLFNRSAGE VARLMAYDGC FNVAVGAWLL
RKRTNEADGD FWYGIGRYHS KTPVHSTRYI LRVHSVMQDI VKKSLADDAK ARTVTYAGAA
APEQQGQ
|
|---|
| |