| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_B0003 |
|---|
| Symbol | |
|---|
| ID | 4787606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008826 |
|---|
| Strand | + |
|---|
| Start bp | 3019 |
|---|
| End bp | 3972 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640092414 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001023019 |
|---|
| Protein GI | 124262549 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.093231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTAT CCAGGCTTCC CTACGCGATG TCGGACGAGA TGCTCCGGCG CCTGGCGGAC
ATCGTTGATG AGCACACGCG GCCAGGCGCC GATCCGGAGC AGTGGGTGAT GCTTCCCGTC
GGGGAGCAGT TCGAGATGCA AGACCTCGGT GACAACGACC TCTTCGTCGG TAGCGTCGAG
GCAGCCGAGC ACCGCGGCCC CGCGTGGCTG CGCGCCATAC TCGAATGGGA CGGGACGTCG
CCGTGGGGTG AGGTGCAGAC GGCATGGCCC GGGCTTGCCT GGCCCTCGCC GTTGGTCTCG
GAGCGGCTGT GCTGCTACCT GCATCTGCTG GGTGCCGGCT TCGGTGTCGA CCGCGACTAC
TTCCCTGGCG CCATCGAGCT CGCTCAGCGG CGCCTCGCGA TGCTGCTCCT CGAGCATCCG
GTGTTGATGC ATCCTCGACT GCGAGTCAGA ACATCAGACC AGCACGGCAA GGGCAAGGTG
TCAGTGGCAC ACGCCGTCGG TCTGGCCCAG CACGGCGCCT TTCCCATGGA GCGTCACGGC
GCCACGAAGG AGCAGCTCGA GCGCTTCGCG AACCACCCGT GCACGCTGCT CGGCCTTCGG
TCTCGTCACG TGAAGGTTCC AGGCCAGCTT CGGATGGCGG TAGGTTACAG GGTGCTCAGT
CTCGCGCTCG GTCAATACGA GAACCATCCG CAGCTGATCG CTTCGATCTA TGAGCTCGAC
AAGCTGGTGA AGCCGGCAAT CTGGCCGGTT CGAGTCGAGG CCATGCCGTT CCTGCGGCTG
TGGCCGGACT CGAGCAAGAC CGTAGAGCCG CAGAACCCGT TCAAGGTGCA CGCTGAGTGC
TTCCTCGCGG CCTGCGGGTC CCATCTGAAC GCAGGCGTCG GTCGACGGCC GGTGTGGCAG
TGGCATGAGT CGCCCGAGTA CCTTGACCTT GCCCCTGAAT CCCGTAGCTC TTAG
|
|---|
| Protein sequence | MPLSRLPYAM SDEMLRRLAD IVDEHTRPGA DPEQWVMLPV GEQFEMQDLG DNDLFVGSVE
AAEHRGPAWL RAILEWDGTS PWGEVQTAWP GLAWPSPLVS ERLCCYLHLL GAGFGVDRDY
FPGAIELAQR RLAMLLLEHP VLMHPRLRVR TSDQHGKGKV SVAHAVGLAQ HGAFPMERHG
ATKEQLERFA NHPCTLLGLR SRHVKVPGQL RMAVGYRVLS LALGQYENHP QLIASIYELD
KLVKPAIWPV RVEAMPFLRL WPDSSKTVEP QNPFKVHAEC FLAACGSHLN AGVGRRPVWQ
WHESPEYLDL APESRSS
|
|---|
| |