| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3824 |
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| Symbol | trmE |
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| ID | 4785935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 4039944 |
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| End bp | 4041386 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640092407 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001023012 |
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| Protein GI | 124269008 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCATTCGG GGCCGACAAT CGCGCTCATG CTGCTGCCTC GCCACCACGA CCCCATCGTC
GCGATCGCGA CGGCACCTGG GCGCGGCGCC GTGGGCATCG TGCGCGTGTC GGGGCGCGGA
CTCGGCGCGC TGATCGAGGC CGTGTGCGGA CGCGCGCTGC AGCCGCGCCA TGCCCACTAC
GGCCCCTTCC TCGACGCGCA GGGCGAGGCC ATCGACCAGG GCCTGGCGCT GCACTTTCCG
GCGCCGCACA GCTACACCGG CGAGGAGGTG CTGGAGCTGC AGGCGCACGG CGGCCCGGTG
CTGCTGCAGC TGCTGCTGGC GCGCTGCCTC GAGGCCGCCG CGCAGCCCGA TGCGCGCAGT
GGCCTGCCGC GCCTGCGCGG CCTGCGTGTG GCCGAGCCCG GCGAGTTCAC CGAGCGCGCC
TTCTTGAACG ACAAGCTCGA CCTGGCCCAG GCCGAGGCGG TGGCCGACCT GATCGACGCC
AGCACCGAGG CCGCGGCCCG CTCGGCTGGC CGGGCGCTGG CCGGCGCGTT CTCGCAGCAG
GTCGACACGC TGCGCGACAG GCTGATCGAG CTGCGCATGC TGGTCGAGGC CACGCTCGAT
TTCCCCGAGG AGGAGATCGA CTTCCTGGAG AAGGCCGACG CGCGCGGCCG GCTCGCCCGC
ATCGCCGAGG CACTGGACGC GGTGCTGGCG CGGGCGAAGC AGGGTGCGCT GCTGCGCGAG
GGCCTGCGCG TGGTGCTGGC CGGGCAGCCC AACGTCGGCA AGAGTTCGCT GCTGAACGCG
CTGGCCGGCG CCGAACTGGC GATCGTGACG CCGATCGCCG GCACCACGCG CGACAAGGTC
GCCGAGACCA TCCAGATCGA GGGCGTGCCC TTGCACGTGG TCGACACCGC GGGCCTGCGT
GCCGAGGACG ATGCGCGCGA TGAGGTCGAG CGCATCGGCA TGCAGCGCAG CTGGGGCGCG
ATCGGCGAGG CCGATGCGGT GATCTTCCTG CACGACCTCA CGCGTGCCGG CGATCCGGGC
TACGACGCTG CGGAACGCGA CATCGAACAA CGCCTGCCGG CCGGCGTGCA CGTGCTCGAT
GTGCACAACA AGGCCGACGC GGCCGCGGCT GGCGCTGCCG CGTTGGCGCC GCAGGCGCTG
CGGCTGTCGG CGCGCACCGG CGAGGGCCTG GACACGCTGC GCCGCCGGCT GTTGCAGCTG
GCCGGCTGGC AGGCCGGCAG CGAGGGCGTG TTCATCGCCC GCACCCGGCA CCTGCAGGCG
CTGCAGGCCA CGGCCGAGCA CCTGGTGCGC GCGCGGCAGC TGGCGGACCG TGCCGACGCC
GCCCTCGACC TGCTGGCCGA GGAGCTGCGG CTGGCGCACG ATGCGCTCGG TGCGATCACC
GGCCGCTACA CGCCGGACGA GTTGCTGGGA GACATCTTCA GCAGGTTCTG CATCGGGAAG
TAG
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| Protein sequence | MHSGPTIALM LLPRHHDPIV AIATAPGRGA VGIVRVSGRG LGALIEAVCG RALQPRHAHY
GPFLDAQGEA IDQGLALHFP APHSYTGEEV LELQAHGGPV LLQLLLARCL EAAAQPDARS
GLPRLRGLRV AEPGEFTERA FLNDKLDLAQ AEAVADLIDA STEAAARSAG RALAGAFSQQ
VDTLRDRLIE LRMLVEATLD FPEEEIDFLE KADARGRLAR IAEALDAVLA RAKQGALLRE
GLRVVLAGQP NVGKSSLLNA LAGAELAIVT PIAGTTRDKV AETIQIEGVP LHVVDTAGLR
AEDDARDEVE RIGMQRSWGA IGEADAVIFL HDLTRAGDPG YDAAERDIEQ RLPAGVHVLD
VHNKADAAAA GAAALAPQAL RLSARTGEGL DTLRRRLLQL AGWQAGSEGV FIARTRHLQA
LQATAEHLVR ARQLADRADA ALDLLAEELR LAHDALGAIT GRYTPDELLG DIFSRFCIGK
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