Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3809 |
Symbol | |
ID | 4785920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 4027008 |
End bp | 4028030 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640092392 |
Product | arabinose-5-phosphate isomerase |
Protein accession | YP_001022997 |
Protein GI | 124268993 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.127508 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGCCAC CCTCCGCTTC TTCTTCCTCT TCCTCCTCGT ATTCCCCGCA GCGCAGCGTC GAGATGGGCG CGCAGGCGCT GGCGGTCGAG GCGCAGGCGC TGGGCGCACT GCAGCAGCGC ATCGTCGGGC CGATGGCCGA CGCGTTCGCA CGGGCGGTCG CGGCCATGCT GGTATGCCGC GGCCGCGTGG TCGTGATGGG CATGGGCAAG AGCGGCCACG TGGGCCGCAA GATCGCCGCG ACACTGGCCT CGACCGGCAC GCCGGCGATG TTCGTGCACC CTGCCGAGGC GAGTCACGGC GACCTGGGCA TGGTGACCCC GTCCGACATC GTGCTGGCGA TCTCGAACTC CGGCGAGAGC GACGAGCTGG CGGCCATCCT GCCGGTGCTC AAGCGGCTGG GCGTCATGCT GATCGCGATC ACCGGCCGGG CCGACTCCAA CCTCGCGCGC CATGCCGAGC TGGTGCTCGA CAGCGCGGTC GCACAGGAGG CCTGTCCGCT GAACCTGGCA CCGACGGCCA GCACCACCGC GCAGATGGCG CTGGGTGACG CCCTCGCCGT CGCGCTGCTC GATGCCCGCG GCTTCAAGGA GGAAGACTTC GCGCGCTCGC ATCCTGGCGG TTCGCTGGGG CGCAAGCTGC TGACGCACGT GCGCGACGTG ATGCGCGGCG GCGACGCGGT GCCGAGCGTG GGGCCGGCAA CGGCGTTCAC CGACCTGATG CGCGAGATGA GCGCGAAGGG CCTGGGCGCC ACAGCGATCG TCGATGACGC CGGCCGCGTG CAGGGCATCT TCACCGACGG CGACCTGCGC CGCCTGATCG AGAAGGGCGG CGACCTGCGC GCGCTGACGG CCGCGGAGGT GATGCATCCG GCGCCGCGCA CGGTGCGCGA CGACGCACTG GCCGTCGATG CCGCCGACCT GATGGAGACG CACCGCATCA CCAGTGTGCT CGTGGTCGAT GCCCAGGGCG TGCTGGTCGG TGCGCTGAAC ATCAACGATC TGCTGCGCGC GAAGGTCATC TGA
|
Protein sequence | MTPPSASSSS SSSYSPQRSV EMGAQALAVE AQALGALQQR IVGPMADAFA RAVAAMLVCR GRVVVMGMGK SGHVGRKIAA TLASTGTPAM FVHPAEASHG DLGMVTPSDI VLAISNSGES DELAAILPVL KRLGVMLIAI TGRADSNLAR HAELVLDSAV AQEACPLNLA PTASTTAQMA LGDALAVALL DARGFKEEDF ARSHPGGSLG RKLLTHVRDV MRGGDAVPSV GPATAFTDLM REMSAKGLGA TAIVDDAGRV QGIFTDGDLR RLIEKGGDLR ALTAAEVMHP APRTVRDDAL AVDAADLMET HRITSVLVVD AQGVLVGALN INDLLRAKVI
|
| |