| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3803 |
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| Symbol | |
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| ID | 4785972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 4021802 |
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| End bp | 4023448 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640092386 |
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| Product | putative choline dehydrogenase lipoprotein oxidoreductase |
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| Protein accession | YP_001022991 |
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| Protein GI | 124268987 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0363471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG ACGTCACCCC CACCTTCGAT CACGTGATCA TCGGCGGCGG CACGGCCGGC
TGCCTGCTGG CCAACCGCCT GAGCGCCGAT CCGGCCAAGC GCGTGCTGCT GCTCGAGGCC
GGTGGCCGCG ACGACTACCA CTGGATCCAC ATCCCGGTCG GCTACCTGCA CTGCATCGGC
AACCCGCGCA CCGACTGGCT CTACCAGACC GAGCCCGATC CGGGGCTGAA CGGCCGCTCG
CTGCGCTACC CGCGCGGCAA GGTGCTGGGC GGCTGCTCGA GCATCAACGG CATGATCTAC
ATGCGCGGCC AGTCGCGCGA CTACGACCAC TGGGCGGCGG TGACCGGCGA CGATGGCTGG
CGCTGGGACG CCTGCCTGCC GGTCTTCAAG CAGCACGAGG ACCACCACGG TGGCGCCGAC
GAGATGCATG GCGCCGGCGG CGAATGGCGG GTCGAGAAGC AGCGCCTGCG CTGGGACGTG
CTGGAGGCGT TCGCGTTGGC CGCGCAGCAG GCCGGCATCC CGGCGAGCGC CGACTTCAAC
CGCGGCAACA ACGAGGGTGT GGGCTACTTC GAGGTCAATC AGCGCGCCGG CTGGCGCTGG
AACACGGCCA AGGCCTTCCT CCGACCGACC TGCTATGGCC GGCCCAACTT CGAGATGTGG
ACCGGCGTGC AGGTGACCCG GCTGCTGATC GAGCGCGGTG CCGACGGCGC GCTGCGCTGC
ACCGGCTGCG ATGTGCAGAC GCCCCACGGC CCCGAGACCG TCCGGGCCAG TGCCGAGGTG
CTGCTCAGCG CCGGTGCGGT GGGTTCGCCG CAGCTGCTGC AGCTGTCGGG CCTGGGACCG
GCGGGGCTGC TGCAGCAGTA CGGCATCGCG GTGGCGCAGG ACCTGCCCGG CGTCGGCGAG
AACCTGCAGG ACCATCTCCA GATTCGCGCC GTCTTCAAGC TGCAGGGCGT GCCGACGCTC
AACACGCTGT CGGCGTCGTG GTGGGGCAGG GCCCGCATCG GCCTGGAATA CGCGTTCAAG
CGCAGCGGAC CGATGAGCAT GGCGCCATCG CAGCTCGGTG CCTTCACCCG CTCGTCGCCG
GACCACACGT GGCCCAACCT CGAGTACCAC GTGCAACCGC TGAGCCTGGA GGCGTTCGGT
GAGCCATTGC ATCGCTTCGA CGCCTTCACG GCGAGCGTCT GCAACCTCAA TCCGACCAGC
CGCGGCGCAA TCCGCATCCG CAGCCCGCGC TTCGAGGACG CGCCGCTCAT CGCGCCGCGC
TACCTGTCCA CCGAAGCCGA CCGCCAGGTG GCGGCCGACA GCCTGCGGGT GACGCGGCGC
ATCGCGGCGC AGCCGGCGTT GGCCAAATAC CGGCCCGAGG AGGTGAAGCC TGGCGTGCAG
TTCCAGACCG ACGCCGAGCT GGCGCGGCTG GCCGGCGACA TCGGCACGAC GATCTTCCAC
CCGGTGGGCA CCTGCCGGAT GGGGCGCGAC GACGACCCGC AGGCTGTCGT CGATGCGCAG
CTGCGGGTAC GCGGCGTGGC CGGCCTGCGG GTGGTCGACG CCAGCGTGAT GCCCACGATC
ACCAGCGGCA ACACCAACAG CCCCACGCTG ATGATTGCGG AGAAGGCGGC CCAGTGGATT
CGGGCCGATC ACGGCCACCG GCGTTGA
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| Protein sequence | MNDDVTPTFD HVIIGGGTAG CLLANRLSAD PAKRVLLLEA GGRDDYHWIH IPVGYLHCIG
NPRTDWLYQT EPDPGLNGRS LRYPRGKVLG GCSSINGMIY MRGQSRDYDH WAAVTGDDGW
RWDACLPVFK QHEDHHGGAD EMHGAGGEWR VEKQRLRWDV LEAFALAAQQ AGIPASADFN
RGNNEGVGYF EVNQRAGWRW NTAKAFLRPT CYGRPNFEMW TGVQVTRLLI ERGADGALRC
TGCDVQTPHG PETVRASAEV LLSAGAVGSP QLLQLSGLGP AGLLQQYGIA VAQDLPGVGE
NLQDHLQIRA VFKLQGVPTL NTLSASWWGR ARIGLEYAFK RSGPMSMAPS QLGAFTRSSP
DHTWPNLEYH VQPLSLEAFG EPLHRFDAFT ASVCNLNPTS RGAIRIRSPR FEDAPLIAPR
YLSTEADRQV AADSLRVTRR IAAQPALAKY RPEEVKPGVQ FQTDAELARL AGDIGTTIFH
PVGTCRMGRD DDPQAVVDAQ LRVRGVAGLR VVDASVMPTI TSGNTNSPTL MIAEKAAQWI
RADHGHRR
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