| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3793 |
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| Symbol | |
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| ID | 4785962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 4011547 |
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| End bp | 4013685 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640092376 |
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| Product | colicin V processing peptidase |
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| Protein accession | YP_001022981 |
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| Protein GI | 124268977 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00145248 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAACG CCTTGCGCAT GGGCTTCGGC GCGCCGCGCC TGCCGATGAT CCTGCAGACC
GAGGCGGCGG AGTGCGGCCT GGCCTGCCTC GCCATGGTGG CTTCGCACCA CGGCCATCGC
AGCGACCTCC CGAGCTTGAG GCAGCGCTTC TCGCTGTCCT TGAAGGGCGT GACGCTGGCC
GACCTGGTGG CGATGGCGGG GCAACTCCAG CTCAATGCAC GGCCGCTGCG CGCGGAGCTC
GCGCATCTTT CGCAGCTGCA GTTGCCCTGC ATCCTGCACT GGGACCTGAA CCACTTCGTG
GTGCTGGCGA AGGTGCAGCG AGGCGTTGCC GTCATCCACG ATCCGGCGCA CGGGGTGCGG
CGGCTGCCGC TGGCCGAGGT CTCGCGCCAC TTCACCGGCG TGGTGCTGGA ACTGATGCCC
GGCACCGGCT TCGAGCCCCG CACCGAACGC CAGCACGTCA GCCTACGGCA GCTGCTCGGC
CCGGTGCGGG GCCTGAAGCG CTCGCTGGCG CAGGTGTTCG CGCTCGCGCT CGCGCTCGAG
GTCTTCATGC TGCTGGCGCC GTTCTTCCTG CAATGGGTGG TCGACGGCGC GCTGCTCAGC
GCCGACCGCG ACCTGCTGCT CACGCTGGTG ATCGGCTTCG GCTTGCTCGT GGTGATTCAG
GTGGCCACCG GTGCCTTGCG GTCCTGGGCG GTGCTCTACC TGTCGAGCAC GCTCAACCTG
CAATGGCTGG GCAATGTGTT CGCACACCTG ATGCGCCTGC CGGTCGAGTG GTTCGAGAAG
CGCCATGCCG GTGACGTGAT GTCGCGTTTC GGCGCGGTGC AGAAGATCCA GCAGACGCTG
ACCACCAGCT TCATCGAGGC CATGCTCGAC GGGCTGCTGG TGGTTGCCAC GCTGGTGATG
ATGTGGGTCT ACAGCGCCAC ATTGACGGCC ATCGCGATCG GCGCGGTGGC GCTCTACGCG
CTGCTGCGCT GGGCCTTCTT CACGCCGCTG CGCGACGCGA CCGAAGAGGC GATCGTGCAC
GATGCGAAGC GCTCGACGCA TTTTCTCGAA TCGCTGCGCG GCGTGCAGGC GATCAAGCTG
TTCAATCGCC AGGACGAGCG CCGCGCCCGC TTCATGAACC TGGTGGTCGA CGCGATGAAC
GCCGACATCG CGATCAAGAA GCTCGAGCTC GCCTTCGCCG TGCTCAACAA GCTGGTGTTC
GGCGTCGAGC GCATCGCCGT CATCGGCATC GGCGCGCTGC TGGTGATGGA GCAGCAGTTC
ACCGTGGGCA TGCTGTTCGC GTTCCTGGCC TTCAAGGAGC AGTTCGCGCA GCGCGTCAGC
GGTCTGATCG ACAAGGCGAT CGAGCTGAAG ATGCTGCGGC TGCAAGGCGA GCGCCTGGCC
GACATCGTGC TGGCGGCGCC CGAGGCGCAG GGCGAGGGCC TGCACGCGGC GCGCGACCTC
GCACCGCGCA TCGAGCTGCG CGACGTGAGC TTCCGCTACG CGGATACCGA GCCCGACGTG
CTGAAGGGCT GCAGCCTGCA CATCGAGCCC GGCGAGGCGG TGGCGATCGT CGGACCGTCG
GGCTGCGGCA AGACCACGCT GCTCAAGCTG ATGCTCGGCA TCCACGCGCC CGCCGCCGGC
GAGATCCGCA TCGGAGGCCT GCCGCTGTCG CAGCTGGGGC TCGGCCGCTG GCGCGCCATG
ATCGGCACCG TGATGCAGGA CGACCAGCTG TTCGCCGGGT CAATTGCCGA CAACATCTCG
TTCTTCGACG TGGATGCCGA TGCCGCCTGG GTCGAGCAGT GCGCCCGGCT GGCCTGCGTG
AACGACGAGA TCGACGCGCT GCCGATGGGT TACCACACGC TGATCGGCGA CATGGGCGCC
AGCCTGTCCG GTGGGCAGCG CCAGCGCATC CTGCTGGCCC GTGCGCTGTA CAAGCGACCT
CGCATCCTGT TTCTCGACGA GGCGACGAGC GCGCTCGATG TCGAGCGGGA GCGGCAGGTG
AACCAGGCCA TCCGCGGGCT CGACATCACG CGCGTGATCG TCGCCCACCG GCCCGAGACC
ATCGCGGCGG CGGCCCGCGT GATCGTGCTC CAGCAGGGGC GTGTCGCGCA GGACCTGCGC
AGCGTGCCGA ACACGCAGCA GTCCGAGCCG GGCAACTGA
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| Protein sequence | MANALRMGFG APRLPMILQT EAAECGLACL AMVASHHGHR SDLPSLRQRF SLSLKGVTLA
DLVAMAGQLQ LNARPLRAEL AHLSQLQLPC ILHWDLNHFV VLAKVQRGVA VIHDPAHGVR
RLPLAEVSRH FTGVVLELMP GTGFEPRTER QHVSLRQLLG PVRGLKRSLA QVFALALALE
VFMLLAPFFL QWVVDGALLS ADRDLLLTLV IGFGLLVVIQ VATGALRSWA VLYLSSTLNL
QWLGNVFAHL MRLPVEWFEK RHAGDVMSRF GAVQKIQQTL TTSFIEAMLD GLLVVATLVM
MWVYSATLTA IAIGAVALYA LLRWAFFTPL RDATEEAIVH DAKRSTHFLE SLRGVQAIKL
FNRQDERRAR FMNLVVDAMN ADIAIKKLEL AFAVLNKLVF GVERIAVIGI GALLVMEQQF
TVGMLFAFLA FKEQFAQRVS GLIDKAIELK MLRLQGERLA DIVLAAPEAQ GEGLHAARDL
APRIELRDVS FRYADTEPDV LKGCSLHIEP GEAVAIVGPS GCGKTTLLKL MLGIHAPAAG
EIRIGGLPLS QLGLGRWRAM IGTVMQDDQL FAGSIADNIS FFDVDADAAW VEQCARLACV
NDEIDALPMG YHTLIGDMGA SLSGGQRQRI LLARALYKRP RILFLDEATS ALDVERERQV
NQAIRGLDIT RVIVAHRPET IAAAARVIVL QQGRVAQDLR SVPNTQQSEP GN
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