| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3790 |
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| Symbol | |
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| ID | 4785959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 4007497 |
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| End bp | 4008888 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640092373 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001022978 |
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| Protein GI | 124268974 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000285165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACGTCTC GGTTGGTGGT GGTGTCCAAT CGGATCGGCG ACCCGCGCAA GGCGGCCGCC
GGCGGGCTGG CCGTCGCATT GGGCGATGCG CTCTCCGAGA GCGGGGGCCT GTGGTTCGGT
TGGAGCGGCA AGGTGGTGGC CGGCGGCGCT CGCGGCGAGG GCGATCTGCA CCTGCAGCCG
TCGGGGAAGG TCACGCTCGC GACGCTCGAT CTCGGCAGCG ACGACCACGC GGCCTATTAC
GCCGGCTACT CGAACCGGGT GCTGTGGCCC GTGTTCCACT ACCGGCTCGA TCTGGCGCAG
TTCGACGACG GGTATTTCGA AGGCTATCAG CGCGTCAACC GGCTGTTCGC CCGCAAGCTG
AGCACGCTGC TGAAGCCGGA CGACATCATC TGGGTGCACG ACTACCACCT GATCCCGCTG
GCGGCCGAGT TGCGCGCTCT CGGCTGCCGT CAGCGCATCG GCTTCTTCCT GCACATCCCG
ATGCCGCCGC CGCTGGTGAT GGCGGCAATC CCGGCGCACG ACATGCTGAT GCGCTCGCTG
TTCGCCTATG ACCTGATCGG GCTGCAGAGC GAGGCCGACG TGGCCCACTT CGCCCGCTAT
GTCGAGATGG AGGCTGGGGC CGAGCGCCTG GGCCGTGACC AGTACCGCGC CTTCGGCCAA
CAGGTTTGTG CGCGGGCCTT CCCGATCGGC ATCGACGTCG ACGAGTTCCA GGCCCTGGCG
CAGACGCCGG AGTCGATCGA GACGCGCGAG ACACTGCGCA GCCAGTACCC GCTGCGTCAG
CTGTTGATCG GGGTCGACCG GCTCGATTAC TCCAAGGGCC TGCCGCAGCG CCTGCGCGCT
TTCCATCGGC TGCTGGCCGA CTACCCCGAG AATCGCAACA GCGCGACCTT GATCCAGGTG
GCCACACCGA CGCGCGAGGG CGTGGAGAGC TACGAGGACA TCCGCCGCGA GCTCGAGGGT
CTGTCGGGGC AGATCAACGG CGAGTACGGC GAACTCGACT GGATGCCGGT GCGCTACATC
CACCGCACGC TGGCGCGGCG ACGGCTGCCG GGGCTGTACC GCGCCGGGCG CGTGGCCCTG
GTCACGCCGC TGCGCGACGG CATGAACCTA GTGGCCAAGG AGTTCGTCGC GGCGCAGGAC
GCTGCCGACC CCGGCGTGCT GGTGCTGTCC CGCTTTGCCG GTGCGGCCGA GCAGATGCGC
GCGGCCCTGC TGGTCAATCC ATACGACATC GGCGCCACCG CGGGTGCGGT GCAGCGCGCG
CTGCGGATGC CGCTGTCCGA GCGGGTGGAG CGGCATCAGG CCTTGCTCGC AGGTGTTCGC
GAGCACGACG TGCACCGTTG GCGACGCGAA TTCCTGCAGG CCTTGCAGGC CGCCGAACGT
GCGCCTGGGT GA
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| Protein sequence | MTSRLVVVSN RIGDPRKAAA GGLAVALGDA LSESGGLWFG WSGKVVAGGA RGEGDLHLQP
SGKVTLATLD LGSDDHAAYY AGYSNRVLWP VFHYRLDLAQ FDDGYFEGYQ RVNRLFARKL
STLLKPDDII WVHDYHLIPL AAELRALGCR QRIGFFLHIP MPPPLVMAAI PAHDMLMRSL
FAYDLIGLQS EADVAHFARY VEMEAGAERL GRDQYRAFGQ QVCARAFPIG IDVDEFQALA
QTPESIETRE TLRSQYPLRQ LLIGVDRLDY SKGLPQRLRA FHRLLADYPE NRNSATLIQV
ATPTREGVES YEDIRRELEG LSGQINGEYG ELDWMPVRYI HRTLARRRLP GLYRAGRVAL
VTPLRDGMNL VAKEFVAAQD AADPGVLVLS RFAGAAEQMR AALLVNPYDI GATAGAVQRA
LRMPLSERVE RHQALLAGVR EHDVHRWRRE FLQALQAAER APG
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