Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3786 |
Symbol | gidB |
ID | 4785955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 4004125 |
End bp | 4004790 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640092369 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_001022974 |
Protein GI | 124268970 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.393771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000261644 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACGGTGG CCCCTTTCGA CGCAAAGGCG CTGGCGCAAG GACTGGAGCA GGGCGCGCAG GCGCTGAGAC TCGAGCTGAC AGCGGTGCAG CAACAGCAAC TGCTGCAGCA CCTGGCGCTG ATCGACCGCT GGAACCGGGT CTACAACCTC ACCGCGGTGC GCGAGCCGGC GCAGATGCTG ACCCAGCACC TGCTCGACAG CTTGGCGGTC GTCGCGCCGC TGCGACGGCA AACACGAGCG ACGGCGATCG CGTTGCTCGA TGTCGGCAGC GGGGCAGGAC TGCCCGGTGT GGCGATTGCG GTCGCTTGCC CGGAAATCCA TGTCAGCTGT GTAGACACGG TCTCGAAGAA GGCCAGTTTC ATCCGGCAGG TGGGGGTGGA GCTTGGGCTG ACGCATTTCC AGGCGCTGCA TGCCCGGGTG GAATCCTTGG CGTCGAGCAA TTTCGACGTG ATCACCTCCC GCGCCTTCGC CTCGCTGGCC GACTTTGTCA CGCTCACCGA GGCGGCGCTT GCGCCCGACG GTGTGTGGAT GGCGATGAAG GGTCAGGTCC CGCACGAGGA AATGGCAGTC TTGCCGTCGT CGATCGAGGT GTTTCACGTG GAACCCTTGC AGGTGCCCGG GCTGGATGCC GAGCGCTGCA TCGTCTGGAT GCATCGAAAG GGCTGA
|
Protein sequence | MTVAPFDAKA LAQGLEQGAQ ALRLELTAVQ QQQLLQHLAL IDRWNRVYNL TAVREPAQML TQHLLDSLAV VAPLRRQTRA TAIALLDVGS GAGLPGVAIA VACPEIHVSC VDTVSKKASF IRQVGVELGL THFQALHARV ESLASSNFDV ITSRAFASLA DFVTLTEAAL APDGVWMAMK GQVPHEEMAV LPSSIEVFHV EPLQVPGLDA ERCIVWMHRK G
|
| |