| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3756 |
|---|
| Symbol | |
|---|
| ID | 4785985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3975700 |
|---|
| End bp | 3976923 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640092339 |
|---|
| Product | putative substrate-binding periplasmic (pbp) ABC transporter protein |
|---|
| Protein accession | YP_001022944 |
|---|
| Protein GI | 124268940 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.260098 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCG TTCGCTCGCG CACCGCACTC GCTGCCGCCG CCACCGCCGG CCTCCTCGCC
GTCGGCGGCA CGCCGGCACA GGCCCAGATC TCCGGGGACA CGGTCAAGAT CGGCTTCATC
ACCGACATGT CGGGCCTGTA CGCCGACATC GACGGCCCCG GCGGCGTCGA GGCCATCAAG
CTGGCCATCA GCGACATGAA GGGCACGGTC GCCGGCAAGA AGATCGAGCT CGTCTACGCC
GATCACCAGA ACAAGGCCGA CGTGGCCGCC AGCAAGGCCC GCGAATGGTT CGACACCCAG
GGCGTCGACA TGCTCATCGG CGGCACCAAC TCCGGCACCG CGCTGGCCAT GACCAAGGTC
GCGGCCGAGA AGAAGAAGCC CTTCATCGCC ATCGGTGCCG GCACCTCGCG CATCTCGAAC
GAGGATTGCA CGCCCTACTC GATCCACTAT GCCTACGACA CCGTGGCGCT GGCCAACGGC
ACCGGCAGCG CAGTCACCAA GGCGGGCGGC AAGTCCTGGT ATTTCCTGAC GGCCGACTAT
GCCTTCGGCC AGTCGCTGCA GAACGACACC AGCAACGTGG TGACGAAATC GGGCGGCCAG
GTGCTCGGCA GCGTCAAGCA CCCGCTGTCG GCCAGCGATT TCTCGTCCTT CCTGCTGCAG
GCGCAGTCGA GCAAGGCGCA GATCCTGGGG CTGGCCAATG CCGGCGGCGA CACCATCAAC
TCGATCAAGG CCGCCAACGA GTTCGGCATC ACGAAGACGA TGAAGCTGGC CGGCCTGCTG
ATGTTCATCA ACGACATCCA TTCGCTGGGC CTGAATGCGA CCCAGGGCAT GTACATGACC
GACAGCTGGT ACTGGAACCA GAGCCCGGAG GCGCGCGCGT GGAGCCGCCG CTTCTTCGAG
AAGATGAAGC GCATGCCCTC GTCGATCCAG GCGGCCGACT ACTCGGCCGC CATGCACTTC
CTGAAGGCCG TCGAGGCCGC CAAGACCGAC GACGGCGACA AGGTCATGGC GCAGATGAAG
GCCATGCCGA TCAACGACTT CTACGCCAAG GGCAGCATCC GCAAGGAAGA CGGTCGCGGC
ATCCACGACA TGTTCCTGCT GCAGGTGAAG TCGCAGCAGG AGTCGACCGA GCCCTGGGAC
TACTTCAAGG TGGTCGAGAA GATCCCCGGC GAACAGGCCT TCACGAAGCT GGCCGACAGC
AAGTGCCCGC TGGTGAAGAA GTGA
|
|---|
| Protein sequence | MTLVRSRTAL AAAATAGLLA VGGTPAQAQI SGDTVKIGFI TDMSGLYADI DGPGGVEAIK
LAISDMKGTV AGKKIELVYA DHQNKADVAA SKAREWFDTQ GVDMLIGGTN SGTALAMTKV
AAEKKKPFIA IGAGTSRISN EDCTPYSIHY AYDTVALANG TGSAVTKAGG KSWYFLTADY
AFGQSLQNDT SNVVTKSGGQ VLGSVKHPLS ASDFSSFLLQ AQSSKAQILG LANAGGDTIN
SIKAANEFGI TKTMKLAGLL MFINDIHSLG LNATQGMYMT DSWYWNQSPE ARAWSRRFFE
KMKRMPSSIQ AADYSAAMHF LKAVEAAKTD DGDKVMAQMK AMPINDFYAK GSIRKEDGRG
IHDMFLLQVK SQQESTEPWD YFKVVEKIPG EQAFTKLADS KCPLVKK
|
|---|
| |