| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3741 |
|---|
| Symbol | |
|---|
| ID | 4786030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3960763 |
|---|
| End bp | 3961260 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640092324 |
|---|
| Product | putative DNA protection during starvation or oxydative stress transcription regulator protein |
|---|
| Protein accession | YP_001022929 |
|---|
| Protein GI | 124268925 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.81724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0592077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA CCCGTACCGC CACGCCGCCG GTGAACATCG GCATCTCGGA GAAGGACCGC
GCGGCGATCG CCAAGGGGCT CAACGCCCTG CTGGCGGACA CCTACACGCT CTACCTCACG
ACCCACAACT TCCACTGGAA CGTGACGGGG CCGATGTTCA ACACGCTGCA CACCATGTTC
ATGACGCAGT ACACCGAGCT GTGGAACGCG GTCGACCCGG TCGCCGAGCG CATCCGTGCG
CTGGGCTTCC CGGCCGCCGG CAGCTACGGC CAGTTCGGCA AGCTGAGTTC GCTGAAGGAC
GCGCCGGCCG AGCCGCCGAA GGCGATGGAC ATGGTGCGCA TCCTCGTCGA GGGCCACGAG
GCGGTGGCGC GCACCGCGCG CGGCATCTTC CCGCTGGCCG ACAAGGCCTC CGACGAGCCC
ACCGCCGACC TGCTGACGCA GCGCCTCACG GTGCACGAGC AGGCGGCGTG GATGCTGCGC
TCGCTGCTCG AGGAGTGA
|
|---|
| Protein sequence | MAKTRTATPP VNIGISEKDR AAIAKGLNAL LADTYTLYLT THNFHWNVTG PMFNTLHTMF
MTQYTELWNA VDPVAERIRA LGFPAAGSYG QFGKLSSLKD APAEPPKAMD MVRILVEGHE
AVARTARGIF PLADKASDEP TADLLTQRLT VHEQAAWMLR SLLEE
|
|---|
| |