| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3702 |
|---|
| Symbol | |
|---|
| ID | 4786051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3913244 |
|---|
| End bp | 3914008 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640092285 |
|---|
| Product | SecA-related metal-binding protein |
|---|
| Protein accession | YP_001022890 |
|---|
| Protein GI | 124268886 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
|---|
| TIGRFAM ID | [TIGR02292] yecA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.569831 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCT CCGCCCATTC CGCGCCCCTG ACCGACCCGG AGATCACCGA GCTCGACGAT
CTGCTGGCCG CGATCCCCGA ACCGCTCGAA CCGCTGGACG CCGTGATGCT CGACGGCTAC
CTGTGCGGCG TGATCGCCCA GCCCGAACTG ATCGACCCGG CGCGCTGGCT GCCGCCGGTG
TTCGACTGGA ACTTCGGTGA TCCCGACCAG CCCGACGCCG GCGTCGAGCT CACGCCGGAC
ACCGCCGGCT GGCATGCCGC GAAGCACGAA CGCCTGCTCG CGCTGGTGAT GCGCCATTAC
GCGGTGCTGG AGCGACAGTT GCGCGAAGAC GCGTGGTTCG ACCCGCTGGT GATGCAGCCC
GACGATGAGC AGGGCCACCC GCTCGAGGGC GCCGCGGCCA TCGGGCCCGC CTTTGCGCCG
TGGGCGATCG GCTTCGAGCA CGCGCTGAAC CAGTTCGACG CGCTCGAATC GCTCAAGCAC
GCCGACCTGC CGGACCTGCT CGCCTGCGTG CGCCGCCACT TGCCCGAGCA GACCGGCGAC
GACGCGGCAT TCAAGAAGGC GCTCGACGAC GAGCACCCGC TGCGCGGCAT GGACGAGGCG
ATCGAGGATC TGGTGTCCAA CGTGGTGGCG CTGGCCGATC TGGCCCGTGG CGAGCGACTC
AAGGTCGAGA CCGTGCGGCG AGCCGGCCCC AAGGTCGGCC GCAACGACCC TTGCCCCTGC
GGCAGCGGCA GGAAGTTCAA GCAGTGCCAC GGCCGCGACG CCTGA
|
|---|
| Protein sequence | MSASAHSAPL TDPEITELDD LLAAIPEPLE PLDAVMLDGY LCGVIAQPEL IDPARWLPPV
FDWNFGDPDQ PDAGVELTPD TAGWHAAKHE RLLALVMRHY AVLERQLRED AWFDPLVMQP
DDEQGHPLEG AAAIGPAFAP WAIGFEHALN QFDALESLKH ADLPDLLACV RRHLPEQTGD
DAAFKKALDD EHPLRGMDEA IEDLVSNVVA LADLARGERL KVETVRRAGP KVGRNDPCPC
GSGRKFKQCH GRDA
|
|---|
| |