| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3674 |
|---|
| Symbol | |
|---|
| ID | 4786082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3885040 |
|---|
| End bp | 3885915 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640092257 |
|---|
| Product | putative urea/short-chain amide transport system permease protein |
|---|
| Protein accession | YP_001022862 |
|---|
| Protein GI | 124268858 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.473884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCTC TCCCTCTCGT CATATCGCAG GTGTTCCACG GCCTGGTGCT CGGCGGCACG
CTGGCGCTCG TCGGCTGCGG CCTGACCATC ATCCTCGGGA CGCTCGGCCT CGTGAACTTC
GCGCACGGCG CGTTCTTCGC GATCGGCGCC TACGCCGGCT GGCTGGCATT CGAATGGACC
GGCTCCTACC TGGCCGCCGT GGTGATCGGC GCGGCCGTGA CCTGCGCCTT CGGCTTCGTC
ATCGAGCGCG GACTGATCAG CCGCTTCTAC CAGCGACCCC ACGAGGACCA GATCCTGCTG
ACCTTCGGCC TGGGCATCGT CATCGTGGAG GCGCTGCGCG CCATCTTCGG CGGCGTCGGC
CGCGCGATGC CGTCGCCCGA CTGGGCCGCC GGCGCCGTGT CGATCGGACC GGTGATCTAC
CCGGAATACC GGCTGGTGGT GTTCGGCATC GCCGCGCTGT CGCTGCTGGT GTTCTACCTG
CTGCTCTACC ACTCCCGGCT CGGCCTGATC GTGCGCGCCG CGATCGAGGA CACGCTGATG
GTGCGCATCC TCGGCCTGCG TGCGGCGCAG ATCAAGGCGG TGGTGTTCGC GATCGGCGTG
CTGGCCGTCG GGCTGGCCGG CGTGGTGATG GCGCCGATCG TCTCGATCAA CCCGGACGTC
GGCGCGCGCT TCATGGTGCA GTCCTTCGTG GTGGTGGTGA TCGGCGGCCT GGGGTCCTTC
CCTGGCGCCA TCATCGGCGG CTTCATCGCC GGCCAGATCC AGACGCTGAC GGCGATCTTC
GAGGCCGCCT ACAGCGACGT GGCGCTGTTC CTGACCATGG TGGCGATCCT GGCGGTCCGC
CCGCGCGGCC TGATGGGCGT GGAGGGACGG AAATGA
|
|---|
| Protein sequence | MPPLPLVISQ VFHGLVLGGT LALVGCGLTI ILGTLGLVNF AHGAFFAIGA YAGWLAFEWT
GSYLAAVVIG AAVTCAFGFV IERGLISRFY QRPHEDQILL TFGLGIVIVE ALRAIFGGVG
RAMPSPDWAA GAVSIGPVIY PEYRLVVFGI AALSLLVFYL LLYHSRLGLI VRAAIEDTLM
VRILGLRAAQ IKAVVFAIGV LAVGLAGVVM APIVSINPDV GARFMVQSFV VVVIGGLGSF
PGAIIGGFIA GQIQTLTAIF EAAYSDVALF LTMVAILAVR PRGLMGVEGR K
|
|---|
| |