| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3629 |
|---|
| Symbol | |
|---|
| ID | 4786095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 3839188 |
|---|
| End bp | 3840465 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640092211 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001022817 |
|---|
| Protein GI | 124268813 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.283791 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG TTGCCGATCT GCCGACGAAC CCCACCGACG CCGGCCTGCC GACGCCGCGC
GTGCCGCGCA GCTACCGCTG CCGCTGCGGG CGGCCGGTGT TCTTCCGTAA CAGCCTGTGC
CACGGCTGCG GCGCGGCGCT GGGCTACGAA GCACTGCGCG GGCAGGTGCT GGCCCTCGAC
CCCGGCCCCG AGGAGAACAC CTGGCACGTG GACGGCGACG CGCAGACGCT GTACCGGCGC
TGCGGCAACT TCGACACCAT CGCCGGCTGC AACTGGCTGG TGCCGGCCTC GGCCGACGGC
CGCTTCCAGC CGCTGTGCCA GGCGTGCCGG CTCAACCGCA CCATCCCCGA CCTGACGCAA
CCCGACCACG CCGAGCTGTG GCGCCGCATC GAGCTGGCGC GGCGGCGGCT GGTGTCGCAG
CTGATCTCGC TGGGCCTGCC GGTCGCGTCG CGCGTGATCG GCGACGACCA GGACGCCGAG
CGCGGCCTGA TGTTCGACGT GCTGGCGCCA CTGCCCGGCG CGCCCGCGGT GATGACGGGG
CATGCCAGCG GCCTGATCAC GCTGAACCTC GACGAGGCCG ACGACGCGGT GCGCGAACGC
ATCCGCGCCG CGATGCGCGA GCCCTACCGC ACGCTGCTGG GGCACTTCCG CCACGAGGTG
GGCCACTACT ACTGGGACCG GCTGGTGGAC GGCACGCCCT GGCTGGACGG CTACCGCGAG
CTGTTCGGCG ACGAGCGCGA CGACTACGCC GCGGCGCTGC AGCGCCACTA CGCCAGCGGG
CCGGCGCCGG ACTGGGCGCA GCGCCACGTG AGCAGCTATG CCAGCACGCA CCCGTGGGAG
GACTGGGCGG AGACCTGGGC GCACTACCTG CACATGGTCG ACACGCACGA CACCGCGCTC
AGCTTCGGCC TCGACGCGCG CACGGTGGCG ATCGAGATCG AGCCCTTCGG GGCCGACGTG
CTGTGGCGCC CCGACGATCC CGGCGCCGCC CACTTCCTGG GCTTCGTCAA CGAATGGGTG
GCCCTGACCA GCGTGCTCAA CGAGCTGTCG CGCAGCATGG GCCAGCACGA CTTCTACCCC
TTCGTGCTGC CGCGTCCGGT GGTGGCGAAG CTGCAGTTCG TGCACCTGGT GGTGCAGGCG
GCGGCGGCCG AGCCGCAGAG CGCGGCGCCC GCGAAGGAAC CGCTCGCTGC GACCGATGCC
GAAGCCGCCG TGCCTCCGGA GGCGCCCTCC GTCAGTGCAG CACCAGCGGC TGCTGCATCA
GCGCCGCGTA GCGACTGA
|
|---|
| Protein sequence | MTDVADLPTN PTDAGLPTPR VPRSYRCRCG RPVFFRNSLC HGCGAALGYE ALRGQVLALD
PGPEENTWHV DGDAQTLYRR CGNFDTIAGC NWLVPASADG RFQPLCQACR LNRTIPDLTQ
PDHAELWRRI ELARRRLVSQ LISLGLPVAS RVIGDDQDAE RGLMFDVLAP LPGAPAVMTG
HASGLITLNL DEADDAVRER IRAAMREPYR TLLGHFRHEV GHYYWDRLVD GTPWLDGYRE
LFGDERDDYA AALQRHYASG PAPDWAQRHV SSYASTHPWE DWAETWAHYL HMVDTHDTAL
SFGLDARTVA IEIEPFGADV LWRPDDPGAA HFLGFVNEWV ALTSVLNELS RSMGQHDFYP
FVLPRPVVAK LQFVHLVVQA AAAEPQSAAP AKEPLAATDA EAAVPPEAPS VSAAPAAAAS
APRSD
|
|---|
| |