Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3625 |
Symbol | pyrF |
ID | 4786151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 3834567 |
End bp | 3835403 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640092207 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001022813 |
Protein GI | 124268809 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.313315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.3554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTC GCGCCCGCCT GCTGGCCGCC GAGCGGCTGA ACGATTCGCT GCTGTGCGTG GGGCTGGACC CCGAGCCGTC CAAGTTCCCG GCGCCGTGGA CCGGCGACGC CACGCGCATC TTCGACTTCT GCGCCCGCAT CGTCGACGCC ACCAAGGACC TGGTGATCGC GTTCAAGCCG CAGATCGCCT ACTTCGCGGC GCACCGGGCC GAAGACCAGC TGGAGCGGCT GATGGCCTAC CTCCGCCGCG TCGCGCCCGA CGTGCCGGTG ATCCTGGACG CCAAGCGCGG CGACATCGGC AGCACCGCCG AGCAGTACGC ACGCGAGGCC TTCGAGCGCT ACCAGGCCGA CGCGGTGACG CTGTCGCCTT TCATGGGCTT CGACTCGGTC GAGCCCTACC TGCGCTGGCC CGGCAAGGGC GCGATCCTGC TGTGCCGCAC CTCCAACCCC GGCGGCAGCG ACCTGCAGAA CCAGCGGCTG GCCGACGTGG ACGGCACACC GCGGCTCTAT GAGCACCTGG CGCAGCTCGC GCAGGGCCCG TGGAACACCA ACGGCCAGCT CGGCCTGGTG GTGGGCGCGA CCTTCCCCGA GGAGCTGGCG CGCGTGCGCG CGCTGGCGCC GACGCTGCCG CTGCTGATCC CCGGCGTCGG CGCGCAAGGC GGCGACGCGG CGGCGACGGT GAAGGCGGCC TGGCGCGGCG ACAAGGCGAC GACGAGCGCG CCGATCATCG TGAACTCCTC GCGCGCGGTG CTGTACGCCG GCCGCGATGC CGAGTTCGCG AGCGCGGCAC GCCAGGTGGC GCTGGCCACG CGGGCGGCGC TGAACGCGGC GCGCTGA
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Protein sequence | MSFRARLLAA ERLNDSLLCV GLDPEPSKFP APWTGDATRI FDFCARIVDA TKDLVIAFKP QIAYFAAHRA EDQLERLMAY LRRVAPDVPV ILDAKRGDIG STAEQYAREA FERYQADAVT LSPFMGFDSV EPYLRWPGKG AILLCRTSNP GGSDLQNQRL ADVDGTPRLY EHLAQLAQGP WNTNGQLGLV VGATFPEELA RVRALAPTLP LLIPGVGAQG GDAAATVKAA WRGDKATTSA PIIVNSSRAV LYAGRDAEFA SAARQVALAT RAALNAAR
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