Gene Mpe_A3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3625 
SymbolpyrF 
ID4786151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3834567 
End bp3835403 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content73% 
IMG OID640092207 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_001022813 
Protein GI124268809 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.313315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.3554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTC GCGCCCGCCT GCTGGCCGCC GAGCGGCTGA ACGATTCGCT GCTGTGCGTG 
GGGCTGGACC CCGAGCCGTC CAAGTTCCCG GCGCCGTGGA CCGGCGACGC CACGCGCATC
TTCGACTTCT GCGCCCGCAT CGTCGACGCC ACCAAGGACC TGGTGATCGC GTTCAAGCCG
CAGATCGCCT ACTTCGCGGC GCACCGGGCC GAAGACCAGC TGGAGCGGCT GATGGCCTAC
CTCCGCCGCG TCGCGCCCGA CGTGCCGGTG ATCCTGGACG CCAAGCGCGG CGACATCGGC
AGCACCGCCG AGCAGTACGC ACGCGAGGCC TTCGAGCGCT ACCAGGCCGA CGCGGTGACG
CTGTCGCCTT TCATGGGCTT CGACTCGGTC GAGCCCTACC TGCGCTGGCC CGGCAAGGGC
GCGATCCTGC TGTGCCGCAC CTCCAACCCC GGCGGCAGCG ACCTGCAGAA CCAGCGGCTG
GCCGACGTGG ACGGCACACC GCGGCTCTAT GAGCACCTGG CGCAGCTCGC GCAGGGCCCG
TGGAACACCA ACGGCCAGCT CGGCCTGGTG GTGGGCGCGA CCTTCCCCGA GGAGCTGGCG
CGCGTGCGCG CGCTGGCGCC GACGCTGCCG CTGCTGATCC CCGGCGTCGG CGCGCAAGGC
GGCGACGCGG CGGCGACGGT GAAGGCGGCC TGGCGCGGCG ACAAGGCGAC GACGAGCGCG
CCGATCATCG TGAACTCCTC GCGCGCGGTG CTGTACGCCG GCCGCGATGC CGAGTTCGCG
AGCGCGGCAC GCCAGGTGGC GCTGGCCACG CGGGCGGCGC TGAACGCGGC GCGCTGA
 
Protein sequence
MSFRARLLAA ERLNDSLLCV GLDPEPSKFP APWTGDATRI FDFCARIVDA TKDLVIAFKP 
QIAYFAAHRA EDQLERLMAY LRRVAPDVPV ILDAKRGDIG STAEQYAREA FERYQADAVT
LSPFMGFDSV EPYLRWPGKG AILLCRTSNP GGSDLQNQRL ADVDGTPRLY EHLAQLAQGP
WNTNGQLGLV VGATFPEELA RVRALAPTLP LLIPGVGAQG GDAAATVKAA WRGDKATTSA
PIIVNSSRAV LYAGRDAEFA SAARQVALAT RAALNAAR