| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3599 |
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| Symbol | |
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| ID | 4786125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3808230 |
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| End bp | 3810764 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640092181 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001022787 |
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| Protein GI | 124268783 |
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| COG category | [C] Energy production and conversion
[K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG2421] Predicted acetamidase/formamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.675813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACG ACCTCCGCCG CTTCTCCACC GACGCCTTCC CGGAAGACCT GCGCCCGGCC
GCCTGGGCCG AGGTGATGGC CAAGGTGCTG ATGGCCCCGG CCGCGCCGGC CTACGACGCA
CCGCCGCTGG CCGGTTACGT GTCGGCGCGC AGCTCGGCGC TGGAATCGGT GTTCGCGCGG
CTCGGCTCGT CGCCGCAGGT GTGGCTGCCG CACCCCGGCA ACGCACGGCG CGGCGGCCAC
ACGGTGCTGA TGCTGGCGCT GCTGGAGGGC AGCGGCCTGG TGGTGGAGGG GCAGGAGTCG
GTGGCGCTGG CGGCCGGCGG CATCGTGCTG CTCGACCCGG CGCGGCCCTG GCGTGTGGAG
CTCAATACCG ATTTCCGGGC GGTGGTGATC CGGCTCGAAT CGGCGAGCTT CGTGCTGCGC
CTGGTGCGCA CCAGCGGGCA GGACCTCAAC ACCATCTCGC CGAAGACCGG CGTGGGCGCG
GTCTGCCTGA ACCTGGTGCG CTCGATCGCC GACGAGCTGG ACCAGCTGGG CCGCCACGAG
CTGCTGCCGA TCGAGGCGAC GTTGATGGAG CTGCTGGTCA CCTGCCTGTC GCACGTGGAC
GATGAAGACG CGCAGGCCGC GGCGTCACCG GACGACTCCA CGTCGGTGCA GCTCGGCCAT
CTGCGGCGCG TGTGCCGCAC GGTCGAGGCG CGGCTCGGCG ACGCCGAGCT GACGCTGGAG
GCGATCGCGG CGCTGGAGGG GCTGTCGCCG CGCTACATCC AGAAGCTGTT CAAGGCCGCG
TCGGCCAGCT TCGGCGAGTA CCTGAAGGCG CGCCGCCTGG AGCGCTGCCG GCTCGACCTG
GCCAACCGCG CGCTGGCGCA CTTCACGATC GCCGAGCTGT GCTTCCGCTG GGGCTTCGGC
GATGCGGCCA ACTTCAGCCG CGCGTTCACT GCGCGCTTCG GTGTCTCGCC CAAGGCCTAC
CGCGCCGCGC CGCCGGCCGA TGCGGCGGCG GGCCCCACGC AGCGTGGCGC GCCGGCGGCC
GGCGTGGCGA CCGCGAGCTC GGCGCGCGCG GCCGCGGTGG CCGACACGCC CGAGGCGCGC
CGCCGGCAGT TCGAGGCGGT GCTGACGGAC CACGAGCGCT ACGCGCTGGC GCTGGCGCTC
GCGCCGAAGC GCGCGGTGCC ACACGCCGCG GAGGCGGGGT TCCCGGAGGC GCTGCCCGGC
GCCGGGCATG CGCCCGAATA CCACTACATC CCGGTGTCCG ACCGGACGGT GCACTGGGGC
TACCTGAGCC GCACGCTGAA GCCGGTGATC AGCGTGCGCT CGGGCGACGT GGTGACGATC
GAGACGCTGA CCCAGCACGC CAGCGACGAC CGCGAACGCA TGATCGACGG CGACCCCGGC
GCCGAGAGCG TGTTCCACTG GACCGCCACG CGCAAGGCGG TGGCGCGGCG CGGCGCCGGG
CCGATGGACG CGTCGGTGTT CGGCCGCGGC GCGGGCGAGG GCTTCGGCGT GCACATCTGC
ACCGGGCCGG TCCACGTGCG GGGCGCCGAG ACCGGCGACG TGCTGGAGGT GCGCATCCTC
GACATCCGTG CACGCCCGAG CTGCCACCCG CAGCATCGCG GCAAGCTGTT CGGCAGCAAT
GCCGCGGCCT GGTGGGGCTA CCAGTACCAC GACCTGCTGA CCGAGCCGAA GAAGCGCGAG
GTGGTCACGC TCTACGAGCT GCAGACCGAC GTGGCGGAGC CGTATGCGAA GGCCGTCTAC
AGCTTCCGCT GGACGCCGCA GACCGACCCC GACGGCGTGC GCCACGAGAC CATCGACTAC
CCCGGCGTGC CGGTCGACCC CGCCAGCGTC GACAAGCGCT ACGGCGTGCT GGCGAAGGCG
CGCGTGCCGA TCCGCCCGCA CTTCGGCCTG CTGGCGGTGG CGCCGAAGGA GAGCGGGCTG
ATCGATTCGG TGCCACCGGG CTACTTCGGC GGCAACCTCG ACAACTGGCG CGCCGGCAAG
GGCGCGCGGC TGTTCCTGCC GGTGTCGGTG GAGGGCGCGC TGTTCTCGGT GGGCGACCCG
CACGCCTCGC AGGGCGATGG CGAGGTCTGC GGCACCGCGA TCGAGTGCTC GCTGACCGGC
AGCTTCCAGC TCGTGCTGCA CAAGCGCGCG CAGATCGCCG ACGGCTTCCT CGCCGACCTG
AACCACCCCT TCCTCGATGC CGAGGACGCC TGGGTGGTGC AGGGCTTCAG CTTCGCCAAC
CACCTGGCCG AGCTGGGCGC GCAGGCACAG ACCCAGGTCT ACCAGAAGTC CTCGCTGGAC
CTGGCGATGC GCGACGCCTT CCGCAAGGCG CGCCGCTACC TGATGCAGGC CCACGGGCTG
GACGAGGACG AGGCGCTGTC GCTGATGTCG GTGGCGGTGG ACTTCGGCGT GACACAGGTC
GCCGACGGCA ACTGGGGCGT GCACGCGGTG ATCCGCAAGG CGATCTTTCC GCCGCAGGCG
GAGGGTGACG GGGCGGGCGC GGCACCCGCC TCGTCGTCGG CGCCGGCTCA GCCGTTGCGG
AACAGGAAGC TGTAG
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| Protein sequence | MLDDLRRFST DAFPEDLRPA AWAEVMAKVL MAPAAPAYDA PPLAGYVSAR SSALESVFAR
LGSSPQVWLP HPGNARRGGH TVLMLALLEG SGLVVEGQES VALAAGGIVL LDPARPWRVE
LNTDFRAVVI RLESASFVLR LVRTSGQDLN TISPKTGVGA VCLNLVRSIA DELDQLGRHE
LLPIEATLME LLVTCLSHVD DEDAQAAASP DDSTSVQLGH LRRVCRTVEA RLGDAELTLE
AIAALEGLSP RYIQKLFKAA SASFGEYLKA RRLERCRLDL ANRALAHFTI AELCFRWGFG
DAANFSRAFT ARFGVSPKAY RAAPPADAAA GPTQRGAPAA GVATASSARA AAVADTPEAR
RRQFEAVLTD HERYALALAL APKRAVPHAA EAGFPEALPG AGHAPEYHYI PVSDRTVHWG
YLSRTLKPVI SVRSGDVVTI ETLTQHASDD RERMIDGDPG AESVFHWTAT RKAVARRGAG
PMDASVFGRG AGEGFGVHIC TGPVHVRGAE TGDVLEVRIL DIRARPSCHP QHRGKLFGSN
AAAWWGYQYH DLLTEPKKRE VVTLYELQTD VAEPYAKAVY SFRWTPQTDP DGVRHETIDY
PGVPVDPASV DKRYGVLAKA RVPIRPHFGL LAVAPKESGL IDSVPPGYFG GNLDNWRAGK
GARLFLPVSV EGALFSVGDP HASQGDGEVC GTAIECSLTG SFQLVLHKRA QIADGFLADL
NHPFLDAEDA WVVQGFSFAN HLAELGAQAQ TQVYQKSSLD LAMRDAFRKA RRYLMQAHGL
DEDEALSLMS VAVDFGVTQV ADGNWGVHAV IRKAIFPPQA EGDGAGAAPA SSSAPAQPLR
NRKL
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