| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3566 |
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| Symbol | mnmA |
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| ID | 4786209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3771412 |
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| End bp | 3772602 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640092147 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001022754 |
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| Protein GI | 124268750 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.786297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGA AGAAGGAGCG GGTGGTGGTC GGGCTGAGCG GCGGGGTCGA CTCCGCGGTC
AGCGCCTGGC TGCTGAAGCA GCAGGGTCAT GAGGTGGTCG GCCTGTTCAT GAAGAACTGG
GAGGACGACG ATGACGACGA ATACTGCTCG TCGCGCCAGG ACTTCCTCGA TGCCGCCAGC
GTGGCCGACG TGATCGGCAT CGAGATCGAG CACGTCAACT TCGCTGCCGA GTACCGGGAC
CGCGTGTTCG CCGAGTTCCT GCGCGAGTAC GAGGCCGGCC GCACACCCAA CCCCGACGTC
CTGTGCAACG CCGAGATCAA GTTCAAGGCC TTCCTGGACC ATGCCCTGCG GCTGGGCGCC
GGCAAGATCG CCACCGGACA TTACGCCCGG GTTCGCCGCG CACCGGCGCT CCCCGGCATG
CCCGATGGGC CTCTTGACGA GTCGAGCGCC GGCGCGCTCG ACCGCGCCCG GGTGCGCGAG
GCGGGCGGCC GCTTCGAGTT GCTCAAGGGG CTGGACGCGA GCAAGGACCA GAGCTATTTC
CTGCACCGCC TGAGCCAGGC GCAGCTGGCG CGCACGCTGT TCCCGGTGGG CGAGTTGCCG
AAGACCGAGG TGCGTCGCAT CGCCGCGGAG ATCAGGCTGC CGGTGGCGGC GAAGAAGGAC
TCGACCGGCA TCTGTTTCAT CGGCGAGCGC CCGTTCCGCG AGTTCCTGAA CCGCTACCTC
GCGCACGCGC CGGGGCCGAT CAAGGACGAG CGCGGCCGCA CGCTCGGCGA GCACGTGGGG
CTGTCCTTCT ACACGCTGGG CCAGCGCAAG GGCATCGGCA TCGGTGGCGT GAAGGAGCGC
GGCGCGGCGC GCGGCGGGGC CGACCATGCA CCCTGGTTCG TGGCCCGCAA GGACCGTCCG
CACAATACGC TGTACGTGGT GCAGGGCCAC GACCATCCGT GGCTGCAGTC GTTCCGGCTG
GAGGCCGACG ACGCCAGCTG GATCGCCGGC ACCCCGCCGG CGCCGGGCGC ACTGGCGGCC
AAGACCCGTT ACCGCCAGGC CGACGCGTCC TGCGTGCTGG CGCCGGGTGC CGACGGTCGC
TTCCGGCTCG ACTTCGGTGT GCCGCAGTGG GCGGTGACGC CGGGCCAGTC GGCGGTGCTG
TACGACGGCG AGGTCTGCCT CGGCGGCGGC GTGATCGCCG CGGCGGCCTG A
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| Protein sequence | MSAKKERVVV GLSGGVDSAV SAWLLKQQGH EVVGLFMKNW EDDDDDEYCS SRQDFLDAAS
VADVIGIEIE HVNFAAEYRD RVFAEFLREY EAGRTPNPDV LCNAEIKFKA FLDHALRLGA
GKIATGHYAR VRRAPALPGM PDGPLDESSA GALDRARVRE AGGRFELLKG LDASKDQSYF
LHRLSQAQLA RTLFPVGELP KTEVRRIAAE IRLPVAAKKD STGICFIGER PFREFLNRYL
AHAPGPIKDE RGRTLGEHVG LSFYTLGQRK GIGIGGVKER GAARGGADHA PWFVARKDRP
HNTLYVVQGH DHPWLQSFRL EADDASWIAG TPPAPGALAA KTRYRQADAS CVLAPGADGR
FRLDFGVPQW AVTPGQSAVL YDGEVCLGGG VIAAAA
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