Gene Mpe_A3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3552 
Symbol 
ID4786195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3761392 
End bp3762315 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID640092133 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001022740 
Protein GI124268736 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATGT CCGACCGCGA CGGCAAGATC TGGATGGACG GCCAACTGGT CGACTGGCGC 
GACGCCAAGA TCCACGTGCT GACCCACACC CTGCACTACG GTTGCGGTGC ATTCGAGGGC
GTGCGCGCGT ACAACACCAT CAAGGGCACG GCGATCTTCC GGCTGCGCGA GCACACCGAG
CGGCTCTTCA ACAGCGCCAA GATCCTGCGC ATGAAGATCC CGTTCTCGCT GGAGCAGGTG
ATGGACGCGC AGCGCGAGGT GGTGCGCGTC AACAAGCTGG AGAGCTGCTA TCTGCGGCCG
CTGACCTGGA TCGGCGACAA GAAGCTCGGC GTCAGTCCCA AGGGCAACAC CATCCACCTG
ATGATCGCCG CCTGGCCCTG GGGCGCCTAC CTCGGCGAGG AAGGGCTCAA GCGCGGCATC
CGCGTCAAGA CGTCGAGCTA CACGCGTCAC CACGTCAACA TCACGATGAC GCAGGCCAAG
GCCGTGAGCA ACTACAGCAA CTCCATCCTC GCCAACATGG AGGCCACCGA CGACGGCTAC
GACGAGGCGC TGCTGCTCGA CGCCTCGGGC TTCGTCAGTG AAGGCGCGGG CGAGAACATC
TTCGTCATCA AGAACGGCGT GATCTACACG CCCGACCTGT CGGCCGGCGC GCTGAACGGC
ATCACGCGCA ACACCGTGTT CTCGATCGCA GCCGACCTGG GGCTGAAGAT CGTCGAGAAG
CGCATCACGC GCGACGAGGT CTACATTGCC GACGAGGCCT TCTTCACCGG CACCGCCGCC
GAGGTCACGC CGATCCGCGA ACTCGACCGC ATCGAGATCG GCATCGGCTC GCGTGGCCCG
ATCACCGAGA AGATCCAGTC GGCCTTCTTC GACATCGTCA ACGGCCGCAA CGCCAAGTAC
GCCGAATGGC TGGCCGCAGT CTGA
 
Protein sequence
MSMSDRDGKI WMDGQLVDWR DAKIHVLTHT LHYGCGAFEG VRAYNTIKGT AIFRLREHTE 
RLFNSAKILR MKIPFSLEQV MDAQREVVRV NKLESCYLRP LTWIGDKKLG VSPKGNTIHL
MIAAWPWGAY LGEEGLKRGI RVKTSSYTRH HVNITMTQAK AVSNYSNSIL ANMEATDDGY
DEALLLDASG FVSEGAGENI FVIKNGVIYT PDLSAGALNG ITRNTVFSIA ADLGLKIVEK
RITRDEVYIA DEAFFTGTAA EVTPIRELDR IEIGIGSRGP ITEKIQSAFF DIVNGRNAKY
AEWLAAV