Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3548 |
Symbol | |
ID | 4786191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 3758748 |
End bp | 3759440 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 640092129 |
Product | hypothetical protein |
Protein accession | YP_001022736 |
Protein GI | 124268732 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.390955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTACA GCCGCCCTCT CCTCGCGGAC CGCCTCGCGG CCGAGTACGT GCTCGGCACC CTGCGCGGCC CGGCGCGTCG CCGTTTCGAG GCGCTCCTGC CCGCGCACCC GGCACTCGCC GCCGCCGTGG CCGGTTGGCA GGCGCGGCTG CTGCCGCTGT CGGCGGCGGT GACGCCCGTG CCCCCCTCGC CCGGTGTCTG GTCGCGGCTC GAGCGGCGGC TGTTCGCGGG GGTCGGCGCC GCGGTGCCGG TGCGCTGGTG GCAGCGGCTG GGGCTGTGGC AGGGGGTGTC GGCCTTCGCC ACGGTGGCCG CGCTCGCGTT GGGTCTGGTG CTGTCGCGGC CCCAGCCGGT GCAGCCGCCG ATCATCGTGG TGATTGCGCC GAATCCGGAG GCCGCCGGCG TGCTGCAGGC CGGCTTCGCC GCGGGCCTCA CGCGCGACGG CCGCGCGCTG GTGCTGCAGC CGATCCACCC GGTGGCGCCG GGCAGCGGCC GCGCCTTCGA GCTGTGGGCC GTGCCGCCGC AGGGAGCGCC GCGCTCGCTG GGCCTGGTGT CGGGCGAGCA GGCCACCACG GTGCGGCGCG GGCTGCTGCT GCGCGACACG GCAGCGTTCG CGGTCAGCCT GGAGCCGAGC GGCGGCTCGC CGACCGGCGC ACCGACCGGA CCGATCCTGT CCGTCGGGAA GCTGCAGATC TGA
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Protein sequence | MDYSRPLLAD RLAAEYVLGT LRGPARRRFE ALLPAHPALA AAVAGWQARL LPLSAAVTPV PPSPGVWSRL ERRLFAGVGA AVPVRWWQRL GLWQGVSAFA TVAALALGLV LSRPQPVQPP IIVVIAPNPE AAGVLQAGFA AGLTRDGRAL VLQPIHPVAP GSGRAFELWA VPPQGAPRSL GLVSGEQATT VRRGLLLRDT AAFAVSLEPS GGSPTGAPTG PILSVGKLQI
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