| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3539 |
|---|
| Symbol | |
|---|
| ID | 4786182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3750757 |
|---|
| End bp | 3753042 |
|---|
| Gene Length | 2286 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640092120 |
|---|
| Product | FAD/FMN-containing dehydrogenases-like protein |
|---|
| Protein accession | YP_001022727 |
|---|
| Protein GI | 124268723 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.709079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCG ACCACCACAT CGTCAACGAC GTCACCCAGC TCAACCCGGT GCGGGTGATG
GCCATCGTCG CGCCAAGCAG TGTCGAGGAC GTGCAGGAGG CGCTGCGGCG CACCACCGGC
CCGGTGTCGG TCGGTGGCGG GCGCTTCAGC ATGGGCGGCC AGACTGCGAG CCCGGGCAGC
CTGCACTTCG ACATGCGCTC GATGAACCGC ATCGTCGCGT TCTCGCCCGA GAACAAGACC
ATCCTCGTGC AGGCCGGCGT GCGCTGGTGC GACATCCAGC GCTTCGTCGA TCCGCACGGC
CTGGCGGTGA AGATCATGCA GACCTACGCC AACTTCACGG TCGGCGGCGC GCTCGGCGTC
AACTGCCACG GCCGCTACGT GGGCCTGGGG CCGCTGGTGC TGTCGGTGCG CAGCATCAAG
CTCGTGCTGC ACGATGGTCG GGCCGTGGTG GCCAGCCGCA CGGCGCATCC GGAGCTGTTC
TTCGGCGCCA TCGGCGGCTA CGGCGCGCTG GGCGTGGTGG TCGAGGTCGA GCTGGATCTG
GCCGACAACC GGCGCGTCAA GCGCATCGAC AAGGTGATGC CGCTGTCGAC CTACGGCGCC
TACTTCAAGG ACACCGTGCG CTGCAACCCG AAGGCGGTGT TCCACAACGC CGACCTCTAC
GGCCCGCACT ACCGCAGCGT GCGCGCCGTG ACCTGGGCCG AGACCGACGA GCCCGCCACC
ACGCCCGACC GCCTGCAGCC GCTGCGCTCC GCCTACCCGC TGCACCAGTA CTTCCTGTGG
GCCGTGTCGG AAACGCCGTT CGGCAAGGAG CGGCGCGAGA AGATCGTCGA TCCGCTGCTC
TACCTGCGCA AGAAGGTGCA CTGGCGCAAC TACGAGGCCG GCTACGACGT GGCCGAGCTC
GAGCCGCCGT CGCGCGCCGA GCGCACCTAT GTGCTGCAAG AGTACTTCAT TCCGGTCGAG
CGGCTGCTGG AGTTCGTGCC GAAGATGGCC GCGGTGCTGA ACCGCCACCG CGTCAACGCA
CTGAACATCT CGATCCGGCA CGCGATGCCT GATCCCGATA CCGCGCTCGG CTGGGCGCCG
ACCGAGACCT TCGCCTTCGT GCTGTATCAC AAGCAGCGCA CGCGCGAGAA CGCCCGCAGC
CGGGTCGGCG TGTGGACCCG CGAACTGATC GACGCCGCGC TGTCGGTCGG GGGCACCTAC
TACCTGCCCT ACCAGCCGCA CGGCACGGTG GAGCAGTTCC ACCGTGCCTA TCCGAAGGCG
GCGCACCTGT TCGCGCTGAA GTGGGAGGTC GACCCGAACT TCCGCTTCAC CAACGTGCTC
TGGGACAAGT ACTACCGCGC CTGGCTCGAC CGAGGCACGC CGCCCTCGGC ACAACCGCCG
GCCAGCGAAT TCCACCAGGT GTTCGACGAC GTCGAGCTGT CCGATGCCTT CTACCGCTTT
CTGCAGAACG TGTTCCGTGT CGCGCCGGAA GATCGCTTCC ACCATCTCAT CGGCGAAGCG
TGTCGGCTGC ACGCCGACGA GGAGACCGTC TACCGTCACA TCCAGCGCGA GCTCAAGAGC
ATCAAGCCGG CGTCGGCCGA CCTGCGCTAC GCGCTGCCCT CGCTGTTCAG GCAGAAGGCC
GAGATGACGC GGCAGACGCT GCAGGTGCTG GGCGGACGCC GCAAGTTCGA CGGCTATGCG
GAGATCGGCT CCAAGGGCCG CTACTACCGC GGCCTGGCCG CCACGCTGGA GCTGCGCGGC
CCGCGCTACT TCATCGACGA GCAGCCGCAG ACCTTCTCGC CGGTCGACAT CATGGAGCGC
GGCCAGATCG GCCGGCTCGG CGTGCACGTG CCGCTGTCCG ATTACGCGCC GCTCGGGCCC
GGCATCGCCG ATGCGAGCCT CGATCTCGTG ACCTGCTACG TGGGCCTGCA CCACATGACA
GCCGAGCGGC TGGGGTATTT CCTGCAGTCG GTGCGGCGCG TGCTGCGGCC CGGCGGCGCC
TTCATCGTGC GCGACCACGA CGTGCGCAGC GACGAACTGC GTGCACTGGT GTCGCTGGCG
CACACCGTCT TCAACGCCGG CCTGGGCGAG AGCTGGGAGA CCAACCGGGC CGAGCTGCGA
TTTTTCGAGT CGGCCAAGAC CTGGGTCGAC CGGCTCCAGG CGCAGGGCTT CGACGACACC
GGGCACCGCG TGCTGCAGGA CAACGACCCG ACCGACAACA CGCTGTTCTG CTTCGTGCGC
CGCCTCGACC CGCAGACGCT GCGCGATCCC GCCGTGGTGG TGCAGGCCCG CGGGGTGCGG
TCTTGA
|
|---|
| Protein sequence | MNTDHHIVND VTQLNPVRVM AIVAPSSVED VQEALRRTTG PVSVGGGRFS MGGQTASPGS
LHFDMRSMNR IVAFSPENKT ILVQAGVRWC DIQRFVDPHG LAVKIMQTYA NFTVGGALGV
NCHGRYVGLG PLVLSVRSIK LVLHDGRAVV ASRTAHPELF FGAIGGYGAL GVVVEVELDL
ADNRRVKRID KVMPLSTYGA YFKDTVRCNP KAVFHNADLY GPHYRSVRAV TWAETDEPAT
TPDRLQPLRS AYPLHQYFLW AVSETPFGKE RREKIVDPLL YLRKKVHWRN YEAGYDVAEL
EPPSRAERTY VLQEYFIPVE RLLEFVPKMA AVLNRHRVNA LNISIRHAMP DPDTALGWAP
TETFAFVLYH KQRTRENARS RVGVWTRELI DAALSVGGTY YLPYQPHGTV EQFHRAYPKA
AHLFALKWEV DPNFRFTNVL WDKYYRAWLD RGTPPSAQPP ASEFHQVFDD VELSDAFYRF
LQNVFRVAPE DRFHHLIGEA CRLHADEETV YRHIQRELKS IKPASADLRY ALPSLFRQKA
EMTRQTLQVL GGRRKFDGYA EIGSKGRYYR GLAATLELRG PRYFIDEQPQ TFSPVDIMER
GQIGRLGVHV PLSDYAPLGP GIADASLDLV TCYVGLHHMT AERLGYFLQS VRRVLRPGGA
FIVRDHDVRS DELRALVSLA HTVFNAGLGE SWETNRAELR FFESAKTWVD RLQAQGFDDT
GHRVLQDNDP TDNTLFCFVR RLDPQTLRDP AVVVQARGVR S
|
|---|
| |