| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3520 |
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| Symbol | |
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| ID | 4786223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3730481 |
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| End bp | 3731815 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640092101 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001022708 |
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| Protein GI | 124268704 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.553559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCA TCGTCCTGGG CGCCGGCATC ATCGGCGTCA GCACCGCCTG GTACCTGCTC
GAGCAGGGGC ACGAGGTCAC GGTCGTCGAC CGCCAGCCCG ACGCCGCGCT GGAAACCAGC
TTCGCCAACG GGGCGCAGAT CTCGGTCAGC TTCTGCGAGC CCTGGGCCAA CGCCGAGGCG
CCGTTGAAGG TGCTGAAGTG GCTGGCGCGC GACGACTCGC CGCTGCTGTT CCGCCCCAAG
CTCGATCCCT GGCAATGGCG CTGGGGCCTG AGCTTCCTGA CGCAATGCAC CGACGGCGCC
TTCGAGCGCA ACGTGCAGCA GCTCGTCGCG CTGGGCCGCT ACAGCCACGA GTCGCTGAAG
GCCCTGGTGG CGCAGACCGG CATCGAGTAC CACCGGCTCG AGCGCGGCAT CCTGCATTTC
TTCAGCAGCC AGAAGGATCT CGAAGGCGGC GCGGCCGGTG CCGAGCTGAT GCGCCGCCAC
GGCGTCGACC GCCGCGTGCT GTCGCGCGAC GAGGTGCTGC GCGTCGAGCC GGCGCTGGCG
AGCTACGGCC CGCGCATCGC CGGCGGCACC TACACGCGGA GCGACGAATC GGGCGACGCA
CGCGTGTTCA CGCAGGAGCT GGCGAAGCGC TGCGCCGCGC GCGGTGCGGT CTTCCTGTAC
GGCCACGCGA TCGATGGCCT GGACCGCGAA GGCGATCGGC TGGGCGCGGT GCGCATCCAC
GACCTCGCGT CACAGCAGCC GCGCACGCTG AAGGCCGATG CCTTCGTGGC GGCGCTCGGC
TCCTACACGG CACCGCTGCT GCGGCCGCTC GGCGTGCACC TCAACATCTA CCCGGCCAAG
GGCTACTCGG CGACGCTGAA GCTGCGCCGG CCGGAGCGCG CGAGCGTGGT CAGCATGATC
GACGACGCGC GCAAGATCGC CGTCTCGCGC CTGGGCGACG AGGTCCGCAT CGCCGGCACC
GCCGAGCTGG CCGGCTACGA CACCGGCCTC GACAGCCCCA CCGCGCGCGT GCGCTGCCAG
GCGCTGGTGC GGCGCTACGA AGAGCTGTTT CCCGGCGTGG CCGATCTGTC CGCACCGAAC
TTCTGGGCCG GCCTGCGGCC GAGCACGCCC ACCAACATTC CCTGCATCGG CCGCAGCCGC
ATCGCGAACC TGTGGGTCAA CGCCGGCCAC GGCACGCTCG GCTGGACGCA TGGCGCGGGC
TCCGGGCGGG CGCTGGCCGA ACTGATCAGC GGCCAGCGGC CGGCACTCGA GTTCGGCTTC
CTCGGCGAGC GCCGGAGCGG CCCCACCTGG GCTGGTGCAC GCCGCGCCAC GGCGGCAGCG
CCCTCGCAAG CCTGA
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| Protein sequence | MKVIVLGAGI IGVSTAWYLL EQGHEVTVVD RQPDAALETS FANGAQISVS FCEPWANAEA
PLKVLKWLAR DDSPLLFRPK LDPWQWRWGL SFLTQCTDGA FERNVQQLVA LGRYSHESLK
ALVAQTGIEY HRLERGILHF FSSQKDLEGG AAGAELMRRH GVDRRVLSRD EVLRVEPALA
SYGPRIAGGT YTRSDESGDA RVFTQELAKR CAARGAVFLY GHAIDGLDRE GDRLGAVRIH
DLASQQPRTL KADAFVAALG SYTAPLLRPL GVHLNIYPAK GYSATLKLRR PERASVVSMI
DDARKIAVSR LGDEVRIAGT AELAGYDTGL DSPTARVRCQ ALVRRYEELF PGVADLSAPN
FWAGLRPSTP TNIPCIGRSR IANLWVNAGH GTLGWTHGAG SGRALAELIS GQRPALEFGF
LGERRSGPTW AGARRATAAA PSQA
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